RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CATSPERDQ86XM0 798 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 YIPF7Q8N8F6 280 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 OR4P4Q8NGL7 312 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 BCAS4Q8TDM0 211 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 EMG1Q92979 244 aaKnown RBP9.8□□□□□ -0.84
HDAC3-204ENST00000469207 STMN2Q93045 179 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 MYDGFQ969H8 173 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 ITFG2Q969R8 447 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 TEX12Q9BXU0 123 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 TMEM133Q9H2Q1 129 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 CLN6Q9NWW5 311 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 DNAJB9Q9UBS3 223 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 SLC7A11Q9UPY5 501 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 SESN1Q9Y6P5 492 aa9.8□□□□□ -0.84
HDAC3-204ENST00000469207 COL7A1Q02388 2944 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 hADV38S2A0JD32 116 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 ZNF670-ZNF695F2Z2N8 137 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 SYT7O43581 403 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 RBP4P02753 201 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 AMY1AP04745 511 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 AMY2AP04746 511 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 PF4V1P10720 104 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 CCL1P22362 96 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-204ENST00000469207 FUT6P51993 359 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 MEF2CQ06413 473 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-204ENST00000469207 MINOS1Q5TGZ0 78 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 PRAMEF5Q5TYX0 476 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 FAHD1Q6P587 224 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 ABHD12Q8N2K0 398 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 PRSS35Q8N3Z0 413 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 CLEC7AQ9BXN2 247 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 MOB1AQ9H8S9 216 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 INPP5EQ9NRR6 644 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 ING3Q9NXR8 418 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 MINOS1-NBL1R4GNA1 71 aa9.79□□□□□ -0.84
HDAC3-204ENST00000469207 IGKV1-9A0A0C4DH69 117 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 A0A1W2PQL4 384 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-204ENST00000469207 SIRPB1O00241 398 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 PF4P02776 101 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 HTR1DP28221 377 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 PEX2P28328 305 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
HDAC3-204ENST00000469207 OR3A1P47881 315 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 ACTR3P61158 418 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 ZNF91Q05481 1191 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 FLOT2Q14254 428 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 KIAA2026Q5HYC2 2103 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 SLX4IPQ5VYV7 408 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 NXNL2Q5VZ03 156 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 TRAPPC6BQ86SZ2 158 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 FAM58AQ8N1B3 248 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 TMEM163Q8TC26 289 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 UTP4Q969X6 686 aaKnown RBP9.78□□□□□ -0.84
HDAC3-204ENST00000469207 BORCS8Q96FH0 119 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 SLC25A33Q9BSK2 321 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 PLEKHA1Q9HB21 404 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 LINC00312Q9Y6C7 94 aa9.78□□□□□ -0.84
HDAC3-204ENST00000469207 TCRBV3S1A0A5B6 114 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 DHRS7CA6NNS2 312 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 KRT8P05787 483 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 PRKACAP17612 351 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 CDK2P24941 298 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 GLIPR1P48060 266 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 POU3F4P49335 361 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 AESQ08117 197 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 C9orf152Q5JTZ5 239 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 C12orf73Q69YU5 71 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 C18orf65Q6ZTR6 163 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 CCDC197Q8NCU1 140 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-204ENST00000469207 RFT1Q96AA3 541 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-204ENST00000469207 CHST5Q9GZS9 411 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF286AQ9HBT8 521 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 DPM3Q9P2X0 92 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC3-204ENST00000469207 POMPQ9Y244 141 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 GSTK1Q9Y2Q3 226 aa9.77□□□□□ -0.85
HDAC3-204ENST00000469207 TSSC4Q9Y5U2 329 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-204ENST00000469207 IGKV1-12A0A0C4DH73 117 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 METTL15A6NJ78 407 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 ZAR1LA6NP61 321 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 ENTPD6O75354 484 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-204ENST00000469207 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 KIR3DL2P43630 455 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 SCN1BQ07699 218 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 TP53I3Q53FA7 332 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 KHDC1LQ5JSQ8 128 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF329Q86UD4 541 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 NRBF2Q96F24 287 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 SPACA5Q96QH8 159 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 MNTQ99583 582 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 ADI1Q9BV57 179 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 KRT84Q9NSB2 600 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 HHLA2Q9UM44 414 aa9.76□□□□□ -0.85
HDAC3-204ENST00000469207 LOC107986453A0A1B0GWG9 222 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 MGST3O14880 152 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 OR2H2O95918 312 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms