RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 HES2Q9Y543 173 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 LRBAP50851 2863 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 DOPEY2Q9Y3R5 2298 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 MAP2P11137 1827 aaKnown RBP2.91□□□□□ -1.94
LSM5-209ENST00000468872 POLR3AO14802 1390 aaPredicted RBP2.9□□□□□ -1.94
LSM5-209ENST00000468872 USP9YO00507 2555 aaPredicted RBP2.9□□□□□ -1.94
LSM5-209ENST00000468872 A0A0A6YYD5 115 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 C7orf66A4D0T2 115 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 CENPXA8MT69 81 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TRBV12-3P01733 135 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 HLA-DQB1P01920 261 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 CSKP41240 450 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TAS2R39P59534 338 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 COX19Q49B96 90 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 LIN9Q5TKA1 542 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 AP1ARQ63HQ0 302 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 OPN5Q6U736 354 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 CD300LGQ6UXG3 332 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 SLC35D2Q76EJ3 337 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 SLC30A8Q8IWU4 369 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TMEM105Q8N8V8 129 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 OR51L1Q8NGJ5 315 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 OR4A15Q8NGL6 344 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TFGQ92734 400 aaPredicted RBP2.9□□□□□ -1.95
LSM5-209ENST00000468872 RERGQ96A58 199 aaPredicted RBP2.9□□□□□ -1.95
LSM5-209ENST00000468872 OR4K3Q96R72 315 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 DOK1Q99704 481 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TBL1YQ9BQ87 522 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 TIMM29Q9BSF4 260 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 OSBPL11Q9BXB4 747 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 EXOSC4Q9NPD3 245 aaKnown RBP2.9□□□□□ -1.95
LSM5-209ENST00000468872 TREX1Q9NSU2 369 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 AFDNP55196 1824 aaKnown RBP2.9□□□□□ -1.95
LSM5-209ENST00000468872 NRXN2Q9P2S2 1712 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 RYR3Q15413 4870 aa2.9□□□□□ -1.95
LSM5-209ENST00000468872 ASXL3Q9C0F0 2248 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 ABCC11Q96J66 1382 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 ITPR2Q14571 2701 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 A0A1W2PRF3 423 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 A0A1W2PRM7 423 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 LINC01619G3V211 115 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 EIF1BO60739 113 aaKnown RBP2.89□□□□□ -1.95
LSM5-209ENST00000468872 LCA5LO95447 670 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 MT-ND4P03905 459 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 EIF1P41567 113 aaKnown RBP2.89□□□□□ -1.95
LSM5-209ENST00000468872 PITPNAQ00169 270 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 TEX30Q5JUR7 227 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 TMEM236Q5W0B7 351 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 KDM4DQ6B0I6 523 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 NDUFAF7Q7L592 441 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 MDP1Q86V88 176 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 DAW1Q8N136 415 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 ZNF615Q8N8J6 731 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 RXFP2Q8WXD0 754 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 KCNS3Q9BQ31 491 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 CHID1Q9BWS9 393 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 KIR3DX1Q9H7L2 352 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 FBXO6Q9NRD1 293 aaPredicted RBP2.89□□□□□ -1.95
LSM5-209ENST00000468872 AGPAT3Q9NRZ7 376 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 RHBDL2Q9NX52 303 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 CRYBG3Q68DQ2 2970 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 OTOGQ6ZRI0 2925 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 ITGB4P16144 1822 aa2.89□□□□□ -1.95
LSM5-209ENST00000468872 FAM208AQ9UK61 1670 aaKnown RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 ANKRD31Q8N7Z5 1873 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 A0A0J9YYE9 177 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 CENPVL3A0A0U1RRI6 287 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 ZNF850A8MQ14 1090 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 POLR3GO15318 223 aaPredicted RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 KDELR3O43731 214 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 TRBC1P01850 177 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 STAG3L2P0CL84 134 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 IVDP26440 423 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 NUP62P37198 522 aaPredicted RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 IFITM3Q01628 133 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 KDSRQ06136 332 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 HNRNPA1L2Q32P51 320 aaKnown RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 SLC25A35Q3KQZ1 300 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 C6orf99Q4VX62 202 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 STEAP4Q687X5 459 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 TMPRSS11AQ6ZMR5 421 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 OSR2Q8N2R0 312 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 DRAM1Q8N682 238 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 OR5T1Q8NG75 326 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 MITD1Q8WV92 249 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 CDS1Q92903 461 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 RDH12Q96NR8 316 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 RNF157Q96PX1 679 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 UPF3BQ9BZI7 483 aaKnown RBP2.88□□□□□ -1.95
LSM5-209ENST00000468872 ARMC7Q9H6L4 198 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 ENOPH1Q9UHY7 261 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 SIGLEC7Q9Y286 467 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 STK38LQ9Y2H1 464 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 SIGLEC9Q9Y336 463 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 CABIN1Q9Y6J0 2220 aa2.88□□□□□ -1.95
LSM5-209ENST00000468872 KIF1BO60333 1816 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 PCM1Q15154 2024 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 HIVEP3Q5T1R4 2406 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 ZNF879B4DU55 563 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms