RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
SEC16A-208ENST00000467838 KCNJ16Q9NPI9 418 aa12.59□□□□□ -0.39
SEC16A-208ENST00000467838 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
SEC16A-208ENST00000467838 AP4M1O00189 453 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 SYNGR3O43761 229 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ANGPTL7O43827 346 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 C1QL1O75973 258 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 CDS2O95674 445 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 CXCL12P48061 93 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 SRPXP78539 464 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 KRBOX4Q5JUW0 171 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 TSPO2Q5TGU0 170 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 SP5Q6BEB4 398 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ZNF100Q8IYN0 542 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 MAML2Q8IZL2 1156 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ZIC4Q8N9L1 334 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ABHD14BQ96IU4 210 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 DEFB126Q9BYW3 111 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ZNF286AQ9HBT8 521 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 NXT1Q9UKK6 140 aaKnown RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 TCFL5Q9UL49 500 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 NPIPA2E9PIF3 369 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 NPIPA3F8WFD2 350 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 SPRY1O43609 319 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 PITX3O75364 302 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 PNLIPP16233 465 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 PPP1CCP36873 323 aaKnown RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 RPS23P62266 143 aaKnown RBP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC16A-208ENST00000467838 SLC22A25Q6T423 547 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 GPR137CQ8N3F9 429 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 REEP6Q96HR9 211 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 OR6C1Q96RD1 312 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
SEC16A-208ENST00000467838 MED12Q93074 2177 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 IGKV1-12A0A0C4DH73 117 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 A0A1W2PPE2 198 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 PPIHO43447 177 aaKnown RBP12.57□□□□□ -0.4
SEC16A-208ENST00000467838 CLN5O75503 358 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 IGKV1D-12P01611 117 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 PRH1P02810 166 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 DAOP14920 347 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 S100PP25815 95 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 EIF2S3P41091 472 aaKnown RBP12.57□□□□□ -0.4
SEC16A-208ENST00000467838 RBP2P50120 134 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 NHLH2Q02577 135 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 HIKESHIQ53FT3 197 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 PHLDA2Q53GA4 152 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 Q6ZPA2 131 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 OR5L1Q8NGL2 311 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 DNASE2BQ8WZ79 361 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 C20orf24Q9BUV8 137 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 ULBP2Q9BZM5 246 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 NIT2Q9NQR4 276 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 ASCC3Q8N3C0 2202 aaKnown RBP12.57□□□□□ -0.4
SEC16A-208ENST00000467838 ABCA7Q8IZY2 2146 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 EML6Q6ZMW3 1958 aa12.57□□□□□ -0.4
SEC16A-208ENST00000467838 OR6C6A6NF89 314 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 CST2P09228 141 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 FXYD4P59646 89 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 ZXDAP98168 799 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 ZNF266Q14584 549 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 EXT1Q16394 746 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PRAMEF20Q5VT98 475 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 HEPN1Q6WQI6 88 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 Q6ZS49 121 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 FAM24BQ8N5W8 94 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 TCTEX1D2Q8WW35 142 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 RBM24Q9BX46 236 aaKnown RBP12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 RARRES3Q9UL19 164 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 LOC102723996A0A087X1L8 192 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 K7ESF4 209 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 GEMIN2O14893 280 aaKnown RBP12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PDCD6O75340 191 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 LIFP15018 202 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 GNMTQ14749 295 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PCOLCEQ15113 449 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PIGYQ3MUY2 71 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 TMEM211Q6ICI0 200 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 MRPL14Q6P1L8 145 aaKnown RBP12.56□□□□□ -0.4
SEC16A-208ENST00000467838 SPSB3Q6PJ21 355 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 TMEM182Q6ZP80 229 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-208ENST00000467838 PPP1R3BQ86XI6 285 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 FBXL14Q8N1E6 418 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 OR11L1Q8NGX0 322 aa12.56□□□□□ -0.4
SEC16A-208ENST00000467838 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms