RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 A0A0U1RQK1 487 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 PSMB3P49720 205 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 S100A12P80511 92 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 TNFAIP6P98066 277 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-203ENST00000467558 NHLRC1Q6VVB1 395 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
BRAT1-203ENST00000467558 SAV1Q9H4B6 383 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-203ENST00000467558 NAA60Q9H7X0 242 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 PSENENQ9NZ42 101 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 ZMIZ1Q9ULJ6 1067 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-203ENST00000467558 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 M6PRP20645 277 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 ZNF528Q3MIS6 628 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 AKIRIN1Q9H9L7 192 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-203ENST00000467558 AK3Q9UIJ7 227 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 IAPPP10997 89 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 FAM214BQ7L5A3 538 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 CORO2AQ92828 525 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 SERTAD4Q9NUC0 356 aa12.08□□□□□ -0.48
BRAT1-203ENST00000467558 ANKRD34BA5PLL1 514 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 LANCL1O43813 399 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 CTSDP07339 412 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 TESK1Q15569 626 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 Q6ZRG5 221 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 FRZBQ92765 325 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 ESRP2Q9H6T0 727 aaKnown RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 DEFA4P12838 97 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 RAB5CP51148 216 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 FAM131CQ96AQ9 280 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 LHFPL6Q9Y693 200 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 CDIPTO14735 213 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 KRASP01116 189 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 IGHMP01871 453 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 DTYMKP23919 212 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 IGFBP7Q16270 282 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 H3F3CQ6NXT2 135 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 MRPL14Q6P1L8 145 aaKnown RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 UNQ9370/PRO34162Q6UXP9 181 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 MDP1Q86V88 176 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 ZNF629Q9UEG4 869 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-203ENST00000467558 TINAGQ9UJW2 476 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
BRAT1-203ENST00000467558 CLEC18AA5D8T8 446 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 ZFP92A6NM28 416 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 MASP2O00187 686 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 THBS3P49746 956 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CLEC18CQ8NCF0 446 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 OR5D13Q8NGL4 314 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 RND1Q92730 232 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 PURGQ9UJV8 347 aaKnown RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 TOR2AQ5JU69 321 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 FDX2Q6P4F2 183 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 RCL1Q9Y2P8 373 aaKnown RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CHCHD2Q9Y6H1 151 aaPredicted RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 M0R1X1 148 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 MPC2O95563 127 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 UCNP55089 124 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CD300CQ08708 224 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CSRP2Q16527 193 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 LINC00114Q6XXX2 140 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 ERGIC1Q969X5 290 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 ZNF355PQ9NSJ1 428 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 TRBV5-7A0A0A0MS05 114 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 NME2P1O60361 137 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 HLA-DQB1P01920 261 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 CD80P33681 288 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
BRAT1-203ENST00000467558 SLC25A40Q8TBP6 338 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 MAP6Q96JE9 813 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 RASL12Q9NYN1 266 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 HEATR5BQ9P2D3 2071 aa12.06□□□□□ -0.48
BRAT1-203ENST00000467558 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 FAM90A27PA6NNH2 459 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 HMSDA8MTL9 139 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 AHRRA9YTQ3 701 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 CA11O75493 328 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 CT45A6P0DMU7 189 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 CT45A5P0DMU8 189 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 CT45A7P0DMV0 189 aa12.05□□□□□ -0.48
BRAT1-203ENST00000467558 HTD2P86397 168 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms