RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 C10orf107Q8IVU9 208 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 ZDHHC22Q8N966 263 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 GATD1Q8NB37 220 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 OR6K3Q8NGY3 331 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 RNASEH2CQ8TDP1 164 aaKnown RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 PDCD6IPQ8WUM4 868 aaKnown RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 CCL17Q92583 94 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 IP6K3Q96PC2 410 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 ANAPC13Q9BS18 74 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 METTL17Q9H7H0 456 aaPredicted RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 PARP11Q9NR21 331 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 CD300AQ9UGN4 299 aa2.39□□□□□ -2.03
VPS13A-209ENST00000467124 AHDC1Q5TGY3 1603 aaPredicted RBP2.39□□□□□ -2.03
VPS13A-209ENST00000467124 A0A1B0GXF2 115 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 GOLGA8IPA6NC78 632 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 MYO1DO94832 1006 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 NRASP01111 189 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 HRASP01112 189 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 KRASP01116 189 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 SCN1AP35498 2009 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 SPAM1P38567 509 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 PMELP40967 661 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 LGALS7P47929 136 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 SKP1P63208 163 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 FUT5Q11128 374 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 BNIP2Q12982 314 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 UBE2NLQ5JXB2 153 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 FAM222AQ5U5X8 452 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 PRSS54Q6PEW0 395 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 TPGS1Q6ZTW0 290 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 DAZ4Q86SG3 579 aaKnown RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 SPICQ8N5J4 248 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 RNF10Q8N5U6 811 aaKnown RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 SLC35G3Q8N808 338 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ANGPTL6Q8NI99 470 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ACTL9Q8TC94 416 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ITLN2Q8WWU7 325 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 RMI2Q96E14 147 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF2Q9BSG1 426 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF717Q9BY31 904 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 MFSD1Q9H3U5 465 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 CHMP4BQ9H444 224 aaKnown RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 WDR55Q9H6Y2 383 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 DAZ1Q9NQZ3 744 aaKnown RBP2.38□□□□□ -2.03
VPS13A-209ENST00000467124 TMEM38BQ9NVV0 291 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 BTRCQ9Y297 605 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 S4R3C0 116 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 ABCB11O95342 1321 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 TUBGCP6Q96RT7 1819 aa2.38□□□□□ -2.03
VPS13A-209ENST00000467124 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 TRAV40A0A0B4J280 105 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 A8MUU9 505 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 PRAMEF26H0Y7S4 382 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 UPK1AO00322 258 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 TOR1AO14656 332 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 RGS5O15539 181 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 OR7C2O60412 319 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-209ENST00000467124 GCLMP48507 274 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 PSMD7P51665 324 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 RBX1P62877 108 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 CD164Q04900 197 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 PRDX1Q06830 199 aaKnown RBP2.37□□□□□ -2.03
VPS13A-209ENST00000467124 OR4D1Q15615 310 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 ZBTB6Q15916 424 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 ZNF404Q494X3 552 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 Q499Y3 187 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 NXNL2Q5VZ03 156 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 PDPK2PQ6A1A2 396 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 TBPL2Q6SJ96 375 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 HMGN2P46Q86SG4 172 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 COMTD1Q86VU5 262 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 C17orf78Q8N4C9 275 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 TWIST2Q8WVJ9 160 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 ZBED3Q96IU2 234 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-209ENST00000467124 RSPO3Q9BXY4 272 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-209ENST00000467124 DIABLOQ9NR28 239 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 STX18Q9P2W9 335 aaKnown RBP2.37□□□□□ -2.03
VPS13A-209ENST00000467124 FBXL3Q9UKT7 428 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 SLC22A14Q9Y267 594 aa2.37□□□□□ -2.03
VPS13A-209ENST00000467124 MFNGO00587 321 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 FFAR1O14842 300 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 COX7A2P2O60397 106 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 MPZL2O60487 215 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 ADAP1O75689 374 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 LHBP01229 141 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 SOD3P08294 240 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 SPNP16150 400 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 IMPA1P29218 277 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 TSPOP30536 169 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 KDELR2P33947 212 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 RPA3P35244 121 aaPredicted RBP2.36□□□□□ -2.03
VPS13A-209ENST00000467124 TTPAP49638 278 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 GDI2P50395 445 aaKnown RBP2.36□□□□□ -2.03
VPS13A-209ENST00000467124 HBG1P69891 147 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 HBG2P69892 147 aa2.36□□□□□ -2.03
VPS13A-209ENST00000467124 SYCP1Q15431 976 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms