RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZNHIT3Q15649 155 aaPredicted RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 TMEM249Q2WGJ8 235 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 COX19Q49B96 90 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ACTBL2Q562R1 376 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 YIF1BQ5BJH7 314 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RNASE13Q5GAN3 156 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 OR10J3Q5JRS4 329 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 TEX30Q5JUR7 227 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PLEKHG7Q6ZR37 379 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 BHLHA15Q7RTS1 189 aaPredicted RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PLCZ1Q86YW0 608 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 FUNDC1Q8IVP5 155 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 NECAP1Q8NC96 275 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ATP6V1C2Q8NEY4 427 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 OR4K2Q8NGD2 314 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RNASEH2CQ8TDP1 164 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 NELFBQ8WX92 580 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 NEURL3Q96EH8 262 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 L3HYPDHQ96EM0 354 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 APOL4Q9BPW4 351 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF649Q9BS31 505 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 CHCHD7Q9BUK0 85 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 TBL1XR1Q9BZK7 514 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 HDHD2Q9H0R4 259 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 LHX5Q9H2C1 402 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 DSN1Q9H410 356 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PLEKHF2Q9H8W4 249 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 PARVGQ9HBI0 331 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 EXOSC4Q9NPD3 245 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 DIABLOQ9NR28 239 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 C1orf109Q9NX04 203 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ENOPH1Q9UHY7 261 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RAB22AQ9UL26 194 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 FARSAQ9Y285 508 aaKnown RBP1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 RFNGQ9Y644 331 aa1.2□□□□□ -2.22
GTF3C3-209ENST00000466862 ELP1O95163 1332 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 IGSF9BQ9UPX0 1349 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LOC102724200A0A096LPH7 203 aaPredicted RBP1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 A0A0G2JMP0 313 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 A0A0X1KG70 313 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 A0A1W2PRG6 482 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 C7orf66A4D0T2 115 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 GOLGA6L10A6NI86 522 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR2AT4A6NND4 320 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 PRAMEF26H0Y7S4 382 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 J3QLI3 93 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 TOX3O15405 576 aaPredicted RBP1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CRXO43186 299 aaPredicted RBP1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 NIPSNAP2O75323 286 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ADAP1O75689 374 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR2A4O95047 310 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 IGLV3-25P01717 112 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 HLA-DQB1P01920 261 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 MAS1P04201 325 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 IGKV5-2P06315 115 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CDK1P06493 297 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR4Q2P0C623 313 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LIMS3P0CW19 117 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LIMS4P0CW20 117 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 TAC1P20366 129 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 PSMB9P28065 219 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CXCL12P48061 93 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CCL23P55773 120 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 RAB8AP61006 207 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 RHOAP61586 193 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 BAXQ07812 192 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 DMC1Q14565 340 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 FBXL19-AS1Q494R0 122 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF404Q494X3 552 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ATP6AP1LQ52LC2 224 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 TIMM23BQ5SRD1 257 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ZFP1Q6P2D0 407 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ZNF880Q6PDB4 577 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 BRD3OSQ6XYD6 125 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 SHISA6Q6ZSJ9 500 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 FAM231DQ6ZW35 169 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 PDPNQ86YL7 162 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 C10orf107Q8IVU9 208 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 RNF10Q8N5U6 811 aaKnown RBP1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LINC00337Q8N6G1 96 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 SLC25A29Q8N8R3 303 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LINC00304Q8N9R0 145 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ACBD4Q8NC06 268 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LFNGQ8NES3 379 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR5T1Q8NG75 326 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR2M7Q8NG81 312 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR2Z1Q8NG97 314 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR5M1Q8NGP8 315 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR9A2Q8NGT5 310 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 OR5AK3PQ8NH89 298 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 LINC01560Q8TB33 94 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CIRBP-AS1Q8TBR5 109 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 FAM45AQ8TCE6 357 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 ORAOV1Q8WV07 137 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 BLNKQ8WV28 456 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 TNFRSF14Q92956 283 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 CPNE4Q96A23 557 aaPredicted RBP1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 SLC25A46Q96AG3 418 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 MRAP2Q96G30 205 aa1.19□□□□□ -2.22
GTF3C3-209ENST00000466862 SMIM8Q96KF7 97 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms