RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 IGKV1-9A0A0C4DH69 117 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A0G2JMP0 313 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 A0A0X1KG70 313 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LOC102723971A0A1B0GUV8 181 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MDFIC2A0A1B0GVS7 189 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LOC107986453A0A1B0GWG9 222 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OOEPA6NGQ2 149 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ACOD1A6NK06 481 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 A6NLC8 198 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LRRC30A6NM36 301 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RNF212BA8MTL3 300 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF732B4DXR9 585 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LOC110117498-PIK3R3F6TDL0 507 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 DVL1O14640 695 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ADAM20O43506 726 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RGS10O43665 173 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF254O75437 659 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 DHRS3O75911 302 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 INMTO95050 263 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 FSTL3O95633 263 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LALBAP00709 142 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 NRASP01111 189 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 APOC1P02654 83 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR2T7P0C7T2 308 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LIMS3P0CW19 117 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LIMS4P0CW20 117 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 DBTP11182 482 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MMP9P14780 707 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 CCL1P22362 96 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 CFHR2P36980 270 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 SRP14P37108 136 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ETV1P50549 477 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 GTF2A1P52655 376 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 GNB2P62879 340 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RIPPLY1Q0D2K3 151 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF829Q3KNS6 432 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 CEACAM21Q3KPI0 293 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 CDONQ4KMG0 1287 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ESCO2Q56NI9 601 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 BCL2L15Q5TBC7 163 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OGFRL1Q5TC84 451 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF691Q5VV52 312 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 PLCXD3Q63HM9 321 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 STUMQ69YW2 141 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ASPHD2Q6ICH7 369 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 BRD3OSQ6XYD6 125 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 KCTD8Q6ZWB6 473 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 COMMD2Q86X83 199 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ANGPTL5Q86XS5 388 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 CALHM1Q8IU99 346 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZDHHC23Q8IYP9 409 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MUC20Q8N307 709 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 SPICQ8N5J4 248 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 SPERTQ8NA61 448 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR4M2Q8NGB6 313 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR52I1Q8NGK6 324 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR11L1Q8NGX0 322 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR2G2Q8NGZ5 317 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 OR2T27Q8NH04 317 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ANGPTL6Q8NI99 470 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 TRMT10AQ8TBZ6 339 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RAB40AQ8WXH6 277 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 AQP3Q92482 292 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RGP1Q92546 391 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ERGIC1Q969X5 290 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ADAT3Q96EY9 351 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 PELI1Q96FA3 418 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RNF170Q96K19 258 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 DUX5Q96PT3 197 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 TBX15Q96SF7 602 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 NKX3-1Q99801 234 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ARPC5LQ9BPX5 153 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 NUDT16L1Q9BRJ7 211 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 PRRG3Q9BZD7 231 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 RGCCQ9H4X1 137 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ELL3Q9HB65 397 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 IMPAD1Q9NX62 359 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 IL36RNQ9UBH0 155 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF69Q9UC07 566 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MIOXQ9UGB7 285 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ENOPH1Q9UHY7 261 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 GNG8Q9UK08 70 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF222Q9UK12 451 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 LRCH1Q9Y2L9 728 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 MPC1Q9Y5U8 109 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 SNX5Q9Y5X3 404 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 AUP1Q9Y679 476 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 SIRT4Q9Y6E7 314 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 TMEM14AQ9Y6G1 99 aa3.94□□□□□ -1.78
EXOSC3-204ENST00000465860 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PPIAL4CA0A0B4J2A2 164 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 KIR2DS1A0A191URI9 304 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 DAPL1A0PJW8 107 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms