RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 Q499Y3 187 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 IDNKQ5T6J7 187 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 THOC7Q6I9Y2 204 aaKnown RBP1.68□□□□□ -2.14
SMC4-205ENST00000465563 ZNF664Q8N3J9 261 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 CCNYL1Q8N7R7 359 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 OR5H2Q8NGV7 314 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 OR8K3Q8NH51 312 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 YIPF5Q969M3 257 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 LRRC39Q96DD0 335 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 CPB2Q96IY4 423 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 OR2A7Q96R45 310 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 WDR55Q9H6Y2 383 aaPredicted RBP1.68□□□□□ -2.14
SMC4-205ENST00000465563 VSIRQ9H7M9 311 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 RAB23Q9ULC3 237 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 RBMX2Q9Y388 322 aaKnown RBP1.68□□□□□ -2.14
SMC4-205ENST00000465563 INSIG2Q9Y5U4 225 aa1.68□□□□□ -2.14
SMC4-205ENST00000465563 NOS1P29475 1434 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 LOC389332A0A1B0GUA5 103 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 GMNCA6NCL1 334 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 IGLL5B9A064 214 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 C9JQL5 133 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 J3QRE1 110 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 GYG2O15488 501 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 NRASP01111 189 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 HRASP01112 189 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 KRASP01116 189 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 TAC1P20366 129 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 SLC6A1P30531 599 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 ARR3P36575 388 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 HTR2BP41595 481 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 SLC18A1P54219 525 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 C2orf80Q0P641 193 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 TPGS1Q6ZTW0 290 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 ATPAF2Q8N5M1 289 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 OR8A1Q8NGG7 326 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 OR6K2Q8NGY2 324 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 OR51Q1Q8NH59 317 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 CCL17Q92583 94 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 PPP1R36Q96LQ0 422 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 QKIQ96PU8 341 aaKnown RBP eCLIP1.67□□□□□ -2.148e-7■■■■■ 29.4
SMC4-205ENST00000465563 THTPAQ9BU02 230 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 TSGA10Q9BZW7 698 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 RAB1BQ9H0U4 201 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 SDHAF2Q9NX18 166 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 RBM12B-AS1Q9P1G2 102 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 CLEC2DQ9UHP7 191 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 LTBP2Q14767 1821 aa1.67□□□□□ -2.14
SMC4-205ENST00000465563 SYNRGQ9UMZ2 1314 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 NDUFS8O00217 210 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 ISLRO14498 428 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 TCAPO15273 167 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 SPOPO43791 374 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 SLC37A4O43826 429 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 RLN2P04090 185 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 SSX1Q16384 188 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 LDLRAD2Q5SZI1 272 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 GLYATQ6IB77 296 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 TMEM144Q7Z5S9 345 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 SPICQ8N5J4 248 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 OR2K2Q8NGT1 345 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 DOK4Q8TEW6 326 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 CDKL2Q92772 493 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 GLT1D1Q96MS3 346 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 TM2D3Q9BRN9 247 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 HINT2Q9BX68 163 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 NXF2Q9GZY0 626 aaKnown RBP1.66□□□□□ -2.14
SMC4-205ENST00000465563 INIPQ9NRY2 104 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 RBM22Q9NW64 420 aaKnown RBP eCLIP1.66□□□□□ -2.14
SMC4-205ENST00000465563 TAS2R1Q9NYW7 299 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 TAC3Q9UHF0 121 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 CYB5R1Q9UHQ9 305 aa1.66□□□□□ -2.14
SMC4-205ENST00000465563 IGHV3-43A0A0B4J1X8 118 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 MYBPHLA2RUH7 354 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 H3BQ85 93 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 CXorf1O96002 111 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 CGB3P0DN86 165 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 CGB7P0DN87 165 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 CCL2P13500 99 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 M6PRP20645 277 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 IMPA1P29218 277 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 DNASE1L1P49184 302 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 ENDOGQ14249 297 aaKnown RBP1.65□□□□□ -2.15
SMC4-205ENST00000465563 ATP6AP1LQ52LC2 224 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 RESP18Q5W5W9 173 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 TMEM215Q68D42 235 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 ZNF470Q6ECI4 717 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 BIRC8Q96P09 236 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 OR2M4Q96R27 311 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 OR2V2Q96R30 315 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 PLEKHA1Q9HB21 404 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 OR2S2Q9NQN1 319 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 NLE1Q9NVX2 485 aaPredicted RBP1.65□□□□□ -2.15
SMC4-205ENST00000465563 MYO9BQ13459 2157 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 ZBED9Q6R2W3 1325 aa1.65□□□□□ -2.15
SMC4-205ENST00000465563 MGAT4DA6NG13 374 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 PSMD11O00231 422 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 UPK2O00526 184 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 ENTPD6O75354 484 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 CDK1P06493 297 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 CECR9P0C854 216 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms