RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 RND2P52198 227 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 HIST1H3AP68431 136 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 BAXQ07812 192 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 RSU1Q15404 277 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR8B8Q15620 311 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 HAGHQ16775 308 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 LBHQ53QV2 105 aaPredicted RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 CARD17Q5XLA6 110 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ZNF343Q6P1L6 599 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 ASCL4Q6XD76 172 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 SSX9Q7RTT3 188 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR5L1Q8NGL2 311 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 OR1L3Q8NH93 324 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 RNASE11Q8TAA1 199 aaKnown RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 POC1BQ8TC44 478 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 PIGTQ969N2 578 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 S100PBPQ96BU1 408 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 PLEKHF2Q9H8W4 249 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 NXT1Q9UKK6 140 aaKnown RBP6.35□□□□□ -1.39
USP48-206ENST00000464577 PIGLQ9Y2B2 252 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 WSB1Q9Y6I7 421 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 EXPH5Q8NEV8 1989 aa6.35□□□□□ -1.39
USP48-206ENST00000464577 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 TRAV1-1A0A0B4J248 108 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 LOC102723971A0A1B0GUV8 181 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 A0A1B0GV50 99 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 A0A1B0GX78 115 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 MED19A0JLT2 244 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 FAM24AA6NFZ4 105 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 ARGFXA6NJG6 315 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 CDRT15L2A8MXV6 281 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 SHISA8B8ZZ34 492 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 MKRN2OSH3BPM6 223 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 CYB5BO43169 146 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 PHF1O43189 567 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 TLX3O43711 291 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 LY86O95711 162 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 MSR1P21757 451 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 PPM1FP49593 454 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 TAS2R60P59551 318 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 PNRC1Q12796 327 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 PHLDA2Q53GA4 152 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 C10orf128Q5T292 105 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 LANCL3Q6ZV70 420 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 STX12Q86Y82 276 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 PRSS58Q8IYP2 241 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 C1orf87Q8N0U7 546 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 SLC35G3Q8N808 338 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 CYB561D1Q8N8Q1 229 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 ZFP62Q8NB50 900 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 GJC3Q8NFK1 279 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 CLDND2Q8NHS1 167 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 FAAP24Q9BTP7 215 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 GPR61Q9BZJ8 451 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 ZNF700Q9H0M5 742 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 ZNF286AQ9HBT8 521 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 LYRM2Q9NU23 88 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 FAM86C1Q9NVL1 165 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 FOXD3Q9UJU5 478 aaPredicted RBP6.34□□□□□ -1.39
USP48-206ENST00000464577 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 LIPGQ9Y5X9 500 aa6.34□□□□□ -1.39
USP48-206ENST00000464577 A0A1W2PPC4 97 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 DUXBA0A1W2PPF3 345 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 CLEC18AA5D8T8 446 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 AQP7P3A6NL99 342 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 METTL12A8MUP2 240 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TRGC2P03986 189 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 CA3P07451 260 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 DBHP09172 617 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 NKX2-1P43699 371 aaPredicted RBP6.34□□□□□ -1.4
USP48-206ENST00000464577 FXYD4P59646 89 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 HERV-K104P61576 105 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 HLA-DRB3P79483 266 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TLE4Q04727 773 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 ENDOGQ14249 297 aaKnown RBP6.34□□□□□ -1.4
USP48-206ENST00000464577 GAMTQ14353 236 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TSPO2Q5TGU0 170 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 OR2T2Q6IF00 324 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TMEM252Q8N6L7 170 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 CLEC18CQ8NCF0 446 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 NFAM1Q8NET5 270 aaPredicted RBP6.34□□□□□ -1.4
USP48-206ENST00000464577 TMEM171Q8WVE6 324 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 REEP6Q96HR9 211 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 FAM210BQ96KR6 192 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 RHOVQ96L33 236 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TMEM56Q96MV1 263 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 C2orf88Q9BSF0 95 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 ABHD14AQ9BUJ0 271 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 MTIF3Q9H2K0 278 aaKnown RBP6.34□□□□□ -1.4
USP48-206ENST00000464577 NKX2-4Q9H2Z4 354 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 IL36GQ9NZH8 169 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 DKKL1Q9UK85 242 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 B3GALT1Q9Y5Z6 326 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.4
USP48-206ENST00000464577 THADAQ6YHU6 1953 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 C3orf85A0A1B0GTC6 90 aa6.33□□□□□ -1.4
USP48-206ENST00000464577 A0A1B0GV90 55 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms