RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 CHST6Q9GZX3 395 aa18.09■□□□□ 0.49
USP4-208ENST00000464168 DNAH9Q9NYC9 4486 aa18.08■□□□□ 0.49
USP4-208ENST00000464168 H3BUI4 141 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 PSPNO60542 156 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 PF4V1P10720 104 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 CD24P25063 80 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 HTR1DP28221 377 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 PEX2P28328 305 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 EPHA2P29317 976 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 CCDC121Q6ZUS5 278 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 CATSPERDQ86XM0 798 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 YIPF7Q8N8F6 280 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 TMEM163Q8TC26 289 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 PLEKHA1Q9HB21 404 aa18.08■□□□□ 0.48
USP4-208ENST00000464168 TCRBV3S1A0A5B6 114 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 TCRBV4S1A1TA0A5B7 111 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 SYT7O43581 403 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 GABRR1P24046 479 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 DUSP1P28562 367 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 NPBWR2P48146 333 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 ZNF91Q05481 1191 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 IL18R1Q13478 541 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 SLX4IPQ5VYV7 408 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 BAIAP2L2Q6UXY1 529 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 ZBTB49Q6ZSB9 765 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 C16orf82Q7Z2V1 217 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 EMG1Q92979 244 aaKnown RBP18.07■□□□□ 0.48
USP4-208ENST00000464168 PRRG3Q9BZD7 231 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 CHST5Q9GZS9 411 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 LIN7BQ9HAP6 207 aa18.07■□□□□ 0.48
USP4-208ENST00000464168 TSSC4Q9Y5U2 329 aaPredicted RBP18.07■□□□□ 0.48
USP4-208ENST00000464168 MITFO75030 526 aaPredicted RBP18.06■□□□□ 0.48
USP4-208ENST00000464168 GATBO75879 557 aaKnown RBP18.06■□□□□ 0.48
USP4-208ENST00000464168 KRT8P05787 483 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 KRTAP10-11P60412 298 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 FLOT2Q14254 428 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 ENTHD1Q8IYW4 607 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 ABHD12Q8N2K0 398 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 MYDGFQ969H8 173 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 BORCS8Q96FH0 119 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 IL4I1Q96RQ9 567 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 TBX5Q99593 518 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 RBFOX1Q9NWB1 397 aaKnown RBP18.06■□□□□ 0.48
USP4-208ENST00000464168 DPM3Q9P2X0 92 aa18.06■□□□□ 0.48
USP4-208ENST00000464168 MGST3O14880 152 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 PF4P02776 101 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 LPLP06858 475 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 SLC35A2P78381 396 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 ZNF146Q15072 292 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 C12orf73Q69YU5 71 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 Q8IYB0 196 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 UTP4Q969X6 686 aaKnown RBP18.05■□□□□ 0.48
USP4-208ENST00000464168 AKR1E2Q96JD6 320 aa18.05■□□□□ 0.48
USP4-208ENST00000464168 UBE2J1Q9Y385 318 aaPredicted RBP18.05■□□□□ 0.48
USP4-208ENST00000464168 TRBV2A0A0J9YWF9 115 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 A0A1W2PQL4 384 aaPredicted RBP18.04■□□□□ 0.48
USP4-208ENST00000464168 WI2-2373I1.2A0A1W2PRP0 233 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 METTL15A6NJ78 407 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 ZAR1LA6NP61 321 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 SERPINA3P01011 423 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 AMY1AP04745 511 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 AMY2AP04746 511 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 BCL3P20749 454 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 ERP29P30040 261 aaKnown RBP18.04■□□□□ 0.48
USP4-208ENST00000464168 OR3A1P47881 315 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 P2RX3P56373 397 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 BDH1Q02338 343 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 ABCA11PQ4W5N1 156 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 PRAMEF5Q5TYX0 476 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 C11orf87Q6NUJ2 197 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 C10orf99Q6UWK7 81 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 FAM58AQ8N1B3 248 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 CCDC197Q8NCU1 140 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 CCDC54Q8NEL0 328 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 STMN2Q93045 179 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 RCC1LQ96I51 464 aaKnown RBP18.04■□□□□ 0.48
USP4-208ENST00000464168 INPP5EQ9NRR6 644 aa18.04■□□□□ 0.48
USP4-208ENST00000464168 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.04■□□□□ 0.48
USP4-208ENST00000464168 RYR3Q15413 4870 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 ENTPD6O75354 484 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 IGLV1-47P01700 117 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 CALCBP10092 127 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 BRS3P32247 399 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 RBP2P50120 134 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 TRAPPC6BQ86SZ2 158 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 GID4Q8IVV7 300 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 PRSS35Q8N3Z0 413 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 DNAAF1Q8NEP3 725 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 CAPSLQ8WWF8 208 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 SLC25A33Q9BSK2 321 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 ADI1Q9BV57 179 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 KRT84Q9NSB2 600 aa18.03■□□□□ 0.48
USP4-208ENST00000464168 IGKV1-9A0A0C4DH69 117 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 SULT1C4O75897 302 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 OR2F2O95006 317 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 FAM107AO95990 144 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 OR2T7P0C7T2 308 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 CDK2P24941 298 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 ATP1B3P54709 279 aa18.02■□□□□ 0.48
USP4-208ENST00000464168 DEFB121Q5J5C9 76 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms