RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CYB5AP00167 134 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 IGHA1P01876 353 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 RBP4P02753 201 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ISG15P05161 165 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 HTR1AP08908 422 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 IGHV1-8P0DP01 117 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 CALCBP10092 127 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF20P17024 532 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 BCL3P20749 454 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 GABRR1P24046 479 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 AZGP1P25311 298 aaKnown RBP15.25■□□□□ 0.03
SF3A1-205ENST00000463818 PEX2P28328 305 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ACTC1P68032 377 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ACTA1P68133 377 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF91Q05481 1191 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 GRK1Q15835 563 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 FAM189A2Q15884 450 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 C2orf68Q2NKX9 166 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 LIAT1Q6ZQX7 453 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 Q6ZTK2 550 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 TPRX1Q8N7U7 411 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 OR11H6Q8NGC7 330 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 OR2T6Q8NHC8 308 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF714Q96N38 554 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 NKX3-1Q99801 234 aaPredicted RBP15.25■□□□□ 0.03
SF3A1-205ENST00000463818 NPFFR1Q9GZQ6 430 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 CHST6Q9GZX3 395 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 RANBP3Q9H6Z4 567 aaPredicted RBP15.25■□□□□ 0.03
SF3A1-205ENST00000463818 AASSQ9UDR5 926 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 FOXJ3Q9UPW0 622 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 J3QLW9 94 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 CSF1P09603 554 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF19P17023 458 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 PRKACAP17612 351 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 CCR9P51686 369 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 SNU13P55769 128 aaKnown RBP15.24■□□□□ 0.03
SF3A1-205ENST00000463818 PDZK1IP1Q13113 114 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF146Q15072 292 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 SSX2Q16385 188 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 LDLRAD2Q5SZI1 272 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF626Q68DY1 528 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 CCBE1Q6UXH8 406 aaPredicted RBP15.24■□□□□ 0.03
SF3A1-205ENST00000463818 LHFPL2Q6ZUX7 228 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 TCF23Q7RTU1 214 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 ACBD7Q8N6N7 88 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 OR4S1Q8NGB4 309 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 MBOAT4Q96T53 435 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 C9orf16Q9BUW7 83 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 GLS2Q9UI32 602 aa15.24■□□□□ 0.03
SF3A1-205ENST00000463818 EXOGQ9Y2C4 368 aaKnown RBP15.24■□□□□ 0.03
SF3A1-205ENST00000463818 NOTCH1P46531 2555 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 TRBV2A0A0J9YWF9 115 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 PSPNO60542 156 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 HIST2H2BDQ6DRA6 164 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 CBR4Q8N4T8 237 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 KLHDC1Q8N7A1 406 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 C11orf44Q8N8P7 122 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 DTX3Q8N9I9 347 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 OR10AC1Q8NH08 325 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 FOXRED1Q96CU9 486 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-205ENST00000463818 LGALS12Q96DT0 336 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 PELI1Q96FA3 418 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 ABCB10Q9NRK6 738 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 HHLA2Q9UM44 414 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 LINC00312Q9Y6C7 94 aa15.23■□□□□ 0.03
SF3A1-205ENST00000463818 SNTNA6NMZ2 147 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 OCM2P0CE71 109 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 OCMP0CE72 109 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-205ENST00000463818 VSIG10L2P0DP72 767 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 ACTA2P62736 377 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 ACTG2P63267 376 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 ALKBH1Q13686 389 aaKnown RBP15.22■□□□□ 0.03
SF3A1-205ENST00000463818 RNF144BQ7Z419 303 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 LHFPL3Q86UP9 236 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF676Q8N7Q3 588 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 OR51A4Q8NGJ6 313 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 RPS4Y2Q8TD47 263 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 STMN2Q93045 179 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 SPSB1Q96BD6 273 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 C4orf36Q96KX1 117 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 OPALINQ96PE5 141 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 CDCA4Q9BXL8 241 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 HMG20AQ9NP66 347 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 TCF19Q9Y242 345 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 GSTK1Q9Y2Q3 226 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 GMPPBQ9Y5P6 360 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 SESN1Q9Y6P5 492 aa15.22■□□□□ 0.03
SF3A1-205ENST00000463818 IGKV1-12A0A0C4DH73 117 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 A6NDX4 124 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 OR4C45A6NMZ5 311 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 SIRPB1O00241 398 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 SH2D1BO14796 132 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 MGST3O14880 152 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 IGKV1D-12P01611 117 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 ERP29P30040 261 aaKnown RBP15.21■□□□□ 0.03
SF3A1-205ENST00000463818 OR3A1P47881 315 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 SPIN3Q5JUX0 258 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms