RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TPTE2P1Q5T6R2 138 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 PRAMEF5Q5TYX0 476 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 CPOQ8IVL8 374 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 ENTHD1Q8IYW4 607 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 ZNF679Q8IYX0 411 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 OR52N4Q8NGI2 321 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 ASB17Q8WXJ9 295 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 SLAMF9Q96A28 289 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 NOL4LQ96MY1 436 aaPredicted RBP11.44□□□□□ -0.58
SMC1A-204ENST00000463684 IKZF2Q9UKS7 526 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 V9GYS6 101 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 LCE6AA0A183 80 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 F8VVB4 439 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 F8VWA3 439 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 MGST3O14880 152 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 IGHA1P01876 353 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 HMGN1P05114 100 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 SNRNP70P08621 437 aaKnown RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 CDK2P24941 298 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 MAGEA2P43356 314 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 ROM1Q03395 351 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 GINS1Q14691 196 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 KPNB1Q14974 876 aaKnown RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 BAIAP2L2Q6UXY1 529 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 HEPN1Q6WQI6 88 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 OR10G2Q8NGC3 310 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 RAX2Q96IS3 184 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 CADM1Q9BY67 442 aaKnown RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
SMC1A-204ENST00000463684 TMEM14AQ9Y6G1 99 aa11.43□□□□□ -0.58
SMC1A-204ENST00000463684 FAM172BPA6NC97 362 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 DHRS7CA6NNS2 312 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 LOC110117498-PIK3R3F6TDL0 507 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 PSPNO60542 156 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 ACTR3P61158 418 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 MFGE8Q08431 387 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-204ENST00000463684 APOFQ13790 326 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 RBM39Q14498 530 aaKnown RBP11.42□□□□□ -0.58
SMC1A-204ENST00000463684 HLA-DRB5Q30154 266 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 BCL2L15Q5TBC7 163 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 OR2T5Q6IEZ7 315 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 CYP2R1Q6VVX0 501 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 THNSL2Q86YJ6 484 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 Q8IYB0 196 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 PGAM4Q8N0Y7 254 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 BBS1Q8NFJ9 593 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 OR14K1Q8NGZ2 314 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 OR2T29Q8NH02 315 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 FEVQ99581 238 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 PCDHB16Q9NRJ7 776 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
SMC1A-204ENST00000463684 LINC00527Q9UJ94 153 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 SMAD5-AS1Q9Y6J3 95 aa11.42□□□□□ -0.58
SMC1A-204ENST00000463684 DYNC2H1Q8NCM8 4307 aaKnown RBP11.42□□□□□ -0.58
SMC1A-204ENST00000463684 FUOMA2VDF0 154 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 MRPL3P09001 348 aaKnown RBP11.41□□□□□ -0.58
SMC1A-204ENST00000463684 CD34P28906 385 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 P2RX3P56373 397 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 HES1Q14469 280 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 SLC25A26Q70HW3 274 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 FOXRED2Q8IWF2 684 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 ELMOD2Q8IZ81 293 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 OR4D6Q8NGJ1 314 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 GIPC3Q8TF64 312 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 TEX12Q9BXU0 123 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 TTTY10Q9BZA0 68 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 CCDC134Q9H6E4 229 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 DCLRE1BQ9H816 532 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 PLEKHA1Q9HB21 404 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 ZNF286AQ9HBT8 521 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 TAS2R3Q9NYW6 316 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 OR52A1Q9UKL2 312 aa11.41□□□□□ -0.58
SMC1A-204ENST00000463684 ZNF256Q9Y2P7 627 aaPredicted RBP11.41□□□□□ -0.58
SMC1A-204ENST00000463684 SACSQ9NZJ4 4579 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 LY6LH3BQJ8 138 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 LY86O95711 162 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 SLC2A5P22732 501 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 DUSP1P28562 367 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms