RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 I3L521 148 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 BCL2L11O43521 198 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 CXCL13O43927 109 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 SFT2D2O95562 160 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 IGFBP2P18065 325 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 AMY2BP19961 511 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 BMP5P22003 454 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 BLVRBP30043 206 aaPredicted RBP8.54□□□□□ -1.04
PTPRD-207ENST00000463477 SNAI3Q3KNW1 292 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 FBXL19-AS1Q494R0 122 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 OR2A2Q6IF42 318 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 PLXDC2Q6UX71 529 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 LHFPL2Q6ZUX7 228 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 C1QL2Q7Z5L3 287 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
PTPRD-207ENST00000463477 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 ADAD2Q8NCV1 583 aaKnown RBP8.54□□□□□ -1.04
PTPRD-207ENST00000463477 OR5AP2Q8NGF4 316 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 MARCH1Q8TCQ1 289 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 PPP1R1CQ8WVI7 109 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF837Q96EG3 531 aaPredicted RBP8.54□□□□□ -1.04
PTPRD-207ENST00000463477 MRPS24Q96EL2 167 aaKnown RBP8.54□□□□□ -1.04
PTPRD-207ENST00000463477 DOCK7Q96N67 2140 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 FOXB1Q99853 325 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 PDCD10Q9BUL8 212 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 C5orf66Q9H5L9 145 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 RNF122Q9H9V4 155 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 GPR35Q9HC97 309 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 RAB18Q9NP72 206 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 IL36GQ9NZH8 169 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 CACNA1DQ01668 2161 aa8.54□□□□□ -1.04
PTPRD-207ENST00000463477 KANTRA0A1W2PQU2 76 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 FAM90A27PA6NNH2 459 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 DBHP09172 617 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF32P17041 273 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZP3P21754 424 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 NTF4P34130 210 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PMELP40967 661 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 FOXF2Q12947 444 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 AADACL3Q5VUY0 350 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 OVCH2Q7RTZ1 564 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 P4HA3Q7Z4N8 544 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 RTN4RL2Q86UN3 420 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PDZD9Q8IXQ8 264 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 RELL2Q8NC24 303 aaPredicted RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PXT1Q8NFP0 134 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 FNDC9Q8TBE3 224 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 LRRC20Q8TCA0 184 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ST8SIA2Q92186 375 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 EMG1Q92979 244 aaKnown RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SPSB4Q96A44 273 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 REEP6Q96HR9 211 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF845Q96IR2 970 aaPredicted RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 DHRS9Q9BPW9 319 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SFXN3Q9BWM7 321 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 OR2H1Q9GZK4 316 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 DNTTIP1Q9H147 329 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 METTL9Q9H1A3 318 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 DECR2Q9NUI1 292 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 JKAMPQ9P055 326 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF230Q9UIE0 474 aaPredicted RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SESN1Q9Y6P5 492 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 RNF222A6NCQ9 220 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 A8MXK9 166 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 RPL36A-HNRNPH2H7BZ11 118 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 XRCC2O43543 280 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 TNFSF13O75888 250 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 MMP7P09237 267 aaPredicted RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 LYL1P12980 280 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 AKR1C4P17516 323 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SERPINA2P20848 420 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 DTYMKP23919 212 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ACKR3P25106 362 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PSMB6P28072 239 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 OR3A2P47893 321 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SNU13P55769 128 aaKnown RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PSG4Q00888 419 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 OR8B8Q15620 311 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SIGIRRQ6IA17 410 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 ALKAL2Q6UX46 152 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 OR13G1Q8NGZ3 307 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 THAP6Q8TBB0 222 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 TMEM230Q96A57 120 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 LRRC46Q96FV0 321 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 WNT5BQ9H1J7 359 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PPA2Q9H2U2 334 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 PCDHB16Q9NRJ7 776 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 GLRX2Q9NS18 164 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 SDHAF2Q9NX18 166 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 RASL12Q9NYN1 266 aa8.53□□□□□ -1.04
PTPRD-207ENST00000463477 MCTS1Q9ULC4 181 aaKnown RBP8.53□□□□□ -1.04
PTPRD-207ENST00000463477 MAST4O15021 2626 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 hCG_38984A0A1B0GV85 526 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms