RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 SEC14L6B5MCN3 397 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 ZNF593O00488 134 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 SCO1O75880 301 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 SMC2O95347 1197 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 CYB5R3P00387 301 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 IGLV3-25P01717 112 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 HLA-DQB1P01920 261 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 MMP7P09237 267 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 CCDC172P0C7W6 258 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 ZNF806P0C7X5 589 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 BGNP21810 368 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 LOXP28300 417 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 KIR3DL2P43630 455 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 FKBP1AP62942 108 aaKnown RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 INCA1Q0VD86 236 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 TOMM34Q15785 309 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 PRSS8Q16651 343 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 CDNFQ49AH0 187 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 C6orf99Q4VX62 202 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 FAM222AQ5U5X8 452 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 KHDRBS2Q5VWX1 349 aaKnown RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 TMEM236Q5W0B7 351 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 DUPD1Q68J44 220 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 IGFL3Q6UXB1 125 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 PID1Q7Z2X4 250 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 SLC7A5P1Q8MH63 180 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 ASCC1Q8N9N2 400 aaKnown RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 SPANXA2-OT1Q8N9U9 137 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 OR5T1Q8NG75 326 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 OR6N2Q8NGY6 317 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 DEDD2Q8WXF8 326 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 GHSRQ92847 366 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 LRRC39Q96DD0 335 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 RBMXL1Q96E39 390 aaKnown RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 NEURL3Q96EH8 262 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 MSANTD3Q96H12 275 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 GLT1D1Q96MS3 346 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 ZNF717Q9BY31 904 aaPredicted RBP2.22□□□□□ -2.05
CLK1-206ENST00000461326 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 VCX3AQ9NNX9 186 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 FBXO8Q9NRD0 319 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 C21orf62Q9NYP8 219 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 MYH7P12883 1935 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 AKAP11Q9UKA4 1901 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 NAV1Q8NEY1 1877 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 CDK5RAP2Q96SN8 1893 aa2.22□□□□□ -2.05
CLK1-206ENST00000461326 FOCADQ5VW36 1801 aa2.21□□□□□ -2.05
CLK1-206ENST00000461326 DOCK2Q92608 1830 aa2.21□□□□□ -2.05
CLK1-206ENST00000461326 C2orf16Q68DN1 1984 aa2.21□□□□□ -2.05
CLK1-206ENST00000461326 OTOFQ9HC10 1997 aa2.21□□□□□ -2.05
CLK1-206ENST00000461326 PAPPA2Q9BXP8 1791 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 C5orf63A6NC05 138 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 FAM25EA8MYX2 175 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 M0R1X1 148 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 GMDSO60547 372 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 RBBP9O75884 186 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 VAPBO95292 243 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 TPM1P09493 284 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 GNRHRP30968 328 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 MLF1P58340 268 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 MTPNP58546 118 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 DEFB115Q30KQ5 88 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 CST9Q5W186 159 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 HMGN2P46Q86SG4 172 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 ST13P4Q8IZP2 240 aaPredicted RBP2.21□□□□□ -2.06
CLK1-206ENST00000461326 RNF10Q8N5U6 811 aaKnown RBP2.21□□□□□ -2.06
CLK1-206ENST00000461326 TRIML2Q8N7C3 387 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 OR4M2Q8NGB6 313 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 OR51A7Q8NH64 312 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 ING5Q8WYH8 240 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 C19orf60Q96EN9 201 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 ALS2CR12Q96Q35 445 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 RHOXF2Q9BQY4 288 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 TIMM29Q9BSF4 260 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 NUDT9Q9BW91 350 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 MAP1LC3CQ9BXW4 147 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 STMN4Q9H169 189 aaPredicted RBP2.21□□□□□ -2.06
CLK1-206ENST00000461326 BOLA2Q9H3K6 86 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 HAUS4Q9H6D7 363 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 RBFOX1Q9NWB1 397 aaKnown RBP2.21□□□□□ -2.06
CLK1-206ENST00000461326 VAX2Q9UIW0 290 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 TFR2Q9UP52 801 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 ATAD5Q96QE3 1844 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 MYH1P12882 1939 aa2.21□□□□□ -2.06
CLK1-206ENST00000461326 SSC5DA1L4H1 1573 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 IGLV2-18A0A075B6J9 118 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 IGHV6-1A0A0B4J1U7 121 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ANKRD20A5PA0PJZ0 165 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 RFXANKO14593 260 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 CCNOP22674 350 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 PMELP40967 661 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 PSMB2P49721 201 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 ETV1P50549 477 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 RPL31P62899 125 aaKnown RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 DYNLL1P63167 89 aaKnown RBP2.2□□□□□ -2.06
CLK1-206ENST00000461326 LAMTOR4Q0VGL1 99 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 MAPRE2Q15555 327 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 AADACL4Q5VUY2 407 aa2.2□□□□□ -2.06
CLK1-206ENST00000461326 APOBEC3HQ6NTF7 200 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms