RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 IGHA1P01876 353 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 ALPLP05186 524 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF20P17024 532 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 AZGP1P25311 298 aaKnown RBP18.4■□□□□ 0.54
PTPN4-207ENST00000460162 POU3F4P49335 361 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 ZNF146Q15072 292 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 GRK1Q15835 563 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 FAM189A2Q15884 450 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 PLA1AQ53H76 456 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 SLC25A30Q5SVS4 291 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 MEDAGQ5VYS4 303 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 RDH10Q8IZV5 341 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 FAM58AQ8N1B3 248 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 MBOAT4Q96T53 435 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 IL36RNQ9UBH0 155 aa18.4■□□□□ 0.54
PTPN4-207ENST00000460162 J3QRE1 110 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 SLC16A6O15403 523 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 ATF1P18846 271 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 BCL3P20749 454 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 GABRR1P24046 479 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 DYNLT3P51808 116 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 ACTA2P62736 377 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 ACTG2P63267 376 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 MINOS1Q5TGZ0 78 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 Q8N2B8 174 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 PYDC1Q8WXC3 89 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 RNFT2Q96EX2 444 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 OPALINQ96PE5 141 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 NKX3-1Q99801 234 aaPredicted RBP18.39■□□□□ 0.53
PTPN4-207ENST00000460162 ZNF702PQ9H963 129 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 FRRS1LQ9P0K9 344 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 SESN1Q9Y6P5 492 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 MINOS1-NBL1R4GNA1 71 aa18.39■□□□□ 0.53
PTPN4-207ENST00000460162 DAPL1A0PJW8 107 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 A6NDX4 124 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 EI24O14681 340 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 MGST3O14880 152 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 PSPNO60542 156 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 ENTPD6O75354 484 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 NPBWR2P48146 333 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 CCR9P51686 369 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 MTCP1P56278 107 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 SNRPGP62308 76 aaKnown RBP18.38■□□□□ 0.53
PTPN4-207ENST00000460162 DYNC1I2Q13409 638 aaKnown RBP18.38■□□□□ 0.53
PTPN4-207ENST00000460162 SSX2Q16385 188 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 LDLRAD2Q5SZI1 272 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 ZNF676Q8N7Q3 588 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 OR52N4Q8NGI2 321 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 CHST6Q9GZX3 395 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 GLS2Q9UI32 602 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 HHLA2Q9UM44 414 aa18.38■□□□□ 0.53
PTPN4-207ENST00000460162 IGHV2-26A0A0B4J1V2 119 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 SNTNA6NMZ2 147 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 HTR1AP08908 422 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 VSIG10L2P0DP72 767 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 PRKACAP17612 351 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 ERP29P30040 261 aaKnown RBP18.37■□□□□ 0.53
PTPN4-207ENST00000460162 OR12D2P58182 307 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 NANOS3P60323 173 aaKnown RBP18.37■□□□□ 0.53
PTPN4-207ENST00000460162 CCBE1Q6UXH8 406 aaPredicted RBP18.37■□□□□ 0.53
PTPN4-207ENST00000460162 ZBTB49Q6ZSB9 765 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 TPRX1Q8N7U7 411 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 C11orf44Q8N8P7 122 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 FGGYQ96C11 551 aa18.37■□□□□ 0.53
PTPN4-207ENST00000460162 A0A0G2JK05 382 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 E9PQ18 207 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 F2RL2O00254 374 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OPN1MWP04001 364 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OCM2P0CE71 109 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OCMP0CE72 109 aaPredicted RBP18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OPN1MW2P0DN77 364 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OPN1MW3P0DN78 364 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OR3A1P47881 315 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 RAB13P51153 203 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 ALDH3A2P51648 485 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 P2RX3P56373 397 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 PDZK1IP1Q13113 114 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 TMEM219Q86XT9 240 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 C1QL4Q86Z23 238 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 ACBD7Q8N6N7 88 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 OR4S1Q8NGB4 309 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 MYCBPQ99417 103 aaPredicted RBP18.36■□□□□ 0.53
PTPN4-207ENST00000460162 CLEC7AQ9BXN2 247 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 TMEM133Q9H2Q1 129 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 HMG20AQ9NP66 347 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 EXOSC4Q9NPD3 245 aaKnown RBP18.36■□□□□ 0.53
PTPN4-207ENST00000460162 SERTAD4Q9NUC0 356 aa18.36■□□□□ 0.53
PTPN4-207ENST00000460162 UBE2J1Q9Y385 318 aaPredicted RBP18.36■□□□□ 0.53
PTPN4-207ENST00000460162 FBXO24O75426 580 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 MT-ND2P03891 347 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 DUSP1P28562 367 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 ZFP1Q6P2D0 407 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 TRAPPC6BQ86SZ2 158 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 OR13C3Q8NGS6 347 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 MRPL48Q96GC5 212 aaKnown RBP18.35■□□□□ 0.53
PTPN4-207ENST00000460162 PRSS22Q9GZN4 317 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 GAL3ST2Q9H3Q3 398 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 RHOFQ9HBH0 211 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 PCDHGB5Q9Y5G0 923 aa18.35■□□□□ 0.53
PTPN4-207ENST00000460162 H3BNX3 289 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms