RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 HSF4Q9ULV5 492 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 WSB1Q9Y6I7 421 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 MS4A18H0YCH9 400 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 RHBDL1O75783 438 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 MS4A18Q3C1V0 323 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 ARL6IP6Q8N6S5 226 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 ADAD2Q8NCV1 583 aaKnown RBP17.43■□□□□ 0.38
SNX27-204ENST00000458013 FBXL17Q9UF56 701 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 HRKO00198 91 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 HPXP02790 462 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 CD1BP29016 333 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 LSM11P83369 360 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■■■ 28.9
SNX27-204ENST00000458013 RASL12Q9NYN1 266 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 PWWP2BQ6NUJ5 590 aa17.43■□□□□ 0.38
SNX27-204ENST00000458013 OR1L6Q8NGR2 347 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 MVB12AQ96EY5 273 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 HSPB2A8KAH6 182 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 FGF2P09038 288 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 HSPB2Q16082 182 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 C21orf62-AS1Q17RA5 79 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 ANGPTL6Q8NI99 470 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 MS4A10Q96PG2 267 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 LMO7DNF2Z398 122 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 LYPD8Q6UX82 237 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 SLC36A1Q7Z2H8 476 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 LILRB1Q8NHL6 650 aaPredicted RBP17.42■□□□□ 0.38
SNX27-204ENST00000458013 IP6K3Q96PC2 410 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 EXOGQ9Y2C4 368 aaKnown RBP17.42■□□□□ 0.38
SNX27-204ENST00000458013 CST4P01036 141 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 FBP1P09467 338 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 CTLA4P16410 223 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 TNFRSF1AP19438 455 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 ACAA2P42765 397 aaKnown RBP17.42■□□□□ 0.38
SNX27-204ENST00000458013 C1QL3Q5VWW1 255 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 LPAR5Q9H1C0 372 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 ITGB4P16144 1822 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 SOCS1O15524 211 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 LY86O95711 162 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 GPR3P46089 330 aa17.42■□□□□ 0.38
SNX27-204ENST00000458013 YBX2Q9Y2T7 364 aaKnown RBP17.42■□□□□ 0.38
SNX27-204ENST00000458013 RNF165Q6ZSG1 346 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 MSRB3Q8IXL7 192 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 SDK1Q7Z5N4 2213 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 KCNE1BA0A087WTH5 132 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 MAGEA5P43359 124 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 RNF212Q495C1 297 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 SMIM12Q96EX1 92 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 TMSB15BA0A087X1C1 80 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 SULT1A1P50225 295 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 ZNF880Q6PDB4 577 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 PP6455Q8WZ26 134 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.41■□□□□ 0.38
SNX27-204ENST00000458013 PCDHGA9Q9Y5G4 932 aaKnown RBP17.41■□□□□ 0.38
SNX27-204ENST00000458013 LOC389332A0A1B0GUA5 103 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 RNFT1Q5M7Z0 435 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 ACER2Q5QJU3 275 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 OR2M3Q8NG83 312 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 ASB10Q8WXI3 467 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 WNT5AP41221 380 aa17.41■□□□□ 0.38
SNX27-204ENST00000458013 MPV17LQ2QL34 196 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 MOB1BQ7L9L4 216 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 ABHD3Q8WU67 409 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 CT55Q8WUE5 264 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 MPC2O95563 127 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 MT-CO3P00414 261 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 KLF3P57682 345 aaPredicted RBP17.4■□□□□ 0.38
SNX27-204ENST00000458013 B2MP61769 119 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 TUSC5Q8IXB3 177 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 C5orf52A6NGY3 159 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 BHLHA15Q7RTS1 189 aaPredicted RBP17.4■□□□□ 0.38
SNX27-204ENST00000458013 SFTPA2Q8IWL1 248 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 FAM60AQ9NP50 221 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 IL20Q9NYY1 176 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 CBY1Q9Y3M2 126 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 PEX11BO96011 259 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 ZNF137PP52743 207 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 ZNF141Q15928 474 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 PIGYQ3MUY2 71 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 SPEM1Q8N4L4 309 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 ZPBPQ9BS86 351 aa17.4■□□□□ 0.38
SNX27-204ENST00000458013 J3QR89 54 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 ST8SIA5O15466 376 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 PPOXP50336 477 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 IQCJQ1A5X6 159 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 MOGAT3Q86VF5 341 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 ZDHHC22Q8N966 263 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 REG1BP48304 166 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 OR4P4Q8NGL7 312 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 FAM210BQ96KR6 192 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 PLPP2O43688 288 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 HRASP01112 189 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 TMIGD3P0DMS9 266 aaPredicted RBP17.39■□□□□ 0.37
SNX27-204ENST00000458013 SUMO3P55854 103 aaPredicted RBP17.39■□□□□ 0.37
SNX27-204ENST00000458013 FAM162BQ5T6X4 162 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 S100A8P05109 93 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 MRPL54Q6P161 138 aaKnown RBP17.39■□□□□ 0.37
SNX27-204ENST00000458013 WDR13Q9H1Z4 485 aa17.39■□□□□ 0.37
SNX27-204ENST00000458013 ZNF275Q9NSD4 429 aaPredicted RBP17.39■□□□□ 0.37
SNX27-204ENST00000458013 AMDHD2Q9Y303 409 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms