RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 K7N7A8 449 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 SPRY1O43609 319 aaPredicted RBP14.24□□□□□ -0.13
USP39-208ENST00000455732 ATP6V1G2O95670 118 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 IGKV1D-12P01611 117 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 IGHV1-69P01742 117 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 HCKP08631 526 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 PRTN3P24158 256 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 ACTG1P63261 375 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 BDH1Q02338 343 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 COL10A1Q03692 680 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 IZUMO2Q6UXV1 221 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 BRD3OSQ6XYD6 125 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 RNF144BQ7Z419 303 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 NANOGP1Q8N7R0 232 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 TBC1D15Q8TC07 691 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 LHX4Q969G2 390 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 MYDGFQ969H8 173 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 CDCA4Q9BXL8 241 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 METTL8Q9H825 291 aaKnown RBP14.24□□□□□ -0.13
USP39-208ENST00000455732 HMG20AQ9NP66 347 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 SCN3BQ9NY72 215 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 TAS2R4Q9NYW5 299 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 ERGIC3Q9Y282 383 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 CLDN34H7C241 214 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 ANGPTL7O43827 346 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 HAND1O96004 215 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 ALDOBP05062 364 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 RPS11P62280 158 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP39-208ENST00000455732 RPL31P62899 125 aaKnown RBP14.23□□□□□ -0.13
USP39-208ENST00000455732 SLC35A2P78381 396 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 ACSM1Q08AH1 577 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 Q499Y3 187 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 OR51A2Q8NGJ7 313 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 OR5D18Q8NGL1 313 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 GCDHQ92947 438 aaPredicted RBP14.23□□□□□ -0.13
USP39-208ENST00000455732 TNFRSF14Q92956 283 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 MND1Q9BWT6 205 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 C19orf12Q9NSK7 152 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 IL36RNQ9UBH0 155 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 PCDHGB5Q9Y5G0 923 aa14.23□□□□□ -0.13
USP39-208ENST00000455732 A0A1W2PPH5 198 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 INMTO95050 263 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 PRKACAP17612 351 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 PPP3R1P63098 170 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 GUCA2AQ02747 115 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 BAMBIQ13145 260 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 BLMHQ13867 455 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 DOC2BQ14184 412 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 NCR3LG1Q68D85 454 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 C12orf54Q6X4T0 127 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 FAM185AQ8N0U4 392 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 OR8H2Q8N162 312 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 ZFP41Q8N8Y5 198 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 ASCC1Q8N9N2 400 aaKnown RBP14.22□□□□□ -0.13
USP39-208ENST00000455732 PXT1Q8NFP0 134 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 OR5D13Q8NGL4 314 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 OR13C5Q8NGS8 318 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 SNX22Q96L94 193 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 DUX5Q96PT3 197 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 NOX4Q9NPH5 578 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 SIRT7Q9NRC8 400 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 PAK1IP1Q9NWT1 392 aaPredicted RBP14.22□□□□□ -0.13
USP39-208ENST00000455732 GLS2Q9UI32 602 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
USP39-208ENST00000455732 TRBV5-7A0A0A0MS05 114 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 MDFIC2A0A1B0GVS7 189 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 TMEM82A0PJX8 343 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 MAGEB3O15480 346 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 GPX5O75715 221 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 IGFBP3P17936 291 aaPredicted RBP14.21□□□□□ -0.13
USP39-208ENST00000455732 FSTP19883 344 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 BMXP51813 675 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 DEFB112Q30KQ8 113 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 TMEM200BQ69YZ2 307 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 C17orf107Q6ZR85 190 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 OR52N4Q8NGI2 321 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 DUSP21Q9H596 190 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 TMEM138Q9NPI0 162 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 LSM2Q9Y333 95 aaKnown RBP14.21□□□□□ -0.13
USP39-208ENST00000455732 TPRKBQ9Y3C4 175 aa14.21□□□□□ -0.13
USP39-208ENST00000455732 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 RNASEK-C17orf49H0YIS7 233 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 GABRPO00591 440 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 RNASE1P07998 156 aaKnown RBP14.2□□□□□ -0.14
USP39-208ENST00000455732 TMEM225BP0DP42 221 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 CELP19835 753 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 CFPP27918 469 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 MTNR1BP49286 362 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 IRF3Q14653 427 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 SLC9A3R2Q15599 337 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 ELP2Q6IA86 826 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 THRSPQ92748 146 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 EXOSC4Q9NPD3 245 aaKnown RBP14.2□□□□□ -0.14
USP39-208ENST00000455732 CKLFQ9UBR5 152 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 RAB26Q9ULW5 256 aa14.2□□□□□ -0.14
USP39-208ENST00000455732 SH2D1BO14796 132 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 PSPNO60542 156 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 HKR1P10072 659 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms