RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TPBGQ13641 420 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 FIP1L1Q6UN15 594 aaKnown RBP16.46■□□□□ 0.23
COL9A3-202ENST00000452372 UNQ9370/PRO34162Q6UXP9 181 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 SATL1Q86VE3 508 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 H1FXQ92522 213 aaKnown RBP16.46■□□□□ 0.23
COL9A3-202ENST00000452372 GPER1Q99527 375 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 FAM234AQ9H0X4 552 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 HMG20AQ9NP66 347 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 FOXJ3Q9UPW0 622 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 TRAV8-7A0A075B6U6 113 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 GABRPO00591 440 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 PIN1P1O15428 100 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 VENTXO95231 258 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 SFTPBP07988 381 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 PRKACAP17612 351 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 EPHA1P21709 976 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 MAPK3P27361 379 aaPredicted RBP16.45■□□□□ 0.22
COL9A3-202ENST00000452372 MAP2K4P45985 399 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 CAPZA1P52907 286 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 COL10A1Q03692 680 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 MLLT11Q13015 90 aaPredicted RBP16.45■□□□□ 0.22
COL9A3-202ENST00000452372 ZNF146Q15072 292 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 TBCEQ15813 527 aaPredicted RBP16.45■□□□□ 0.22
COL9A3-202ENST00000452372 ARMCX4Q5H9R4 360 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 KLF17Q5JT82 389 aaPredicted RBP16.45■□□□□ 0.22
COL9A3-202ENST00000452372 SPIN3Q5JUX0 258 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 DDI2Q5TDH0 399 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 PXT1Q8NFP0 134 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 UFD1Q92890 307 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 WDFY2Q96P53 400 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 IL36RNQ9UBH0 155 aa16.45■□□□□ 0.22
COL9A3-202ENST00000452372 TRBV23-1A0A0A0MS06 115 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 K7N7A8 449 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 ZNF737O75373 536 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 TK1P04183 234 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 HSMCR30P0CW71 290 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 MMP9P14780 707 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 ZNF93P35789 620 aaPredicted RBP16.44■□□□□ 0.22
COL9A3-202ENST00000452372 ARF6P62330 175 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 ACSM3Q53FZ2 586 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 LIPKQ5VXJ0 399 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 ASCL4Q6XD76 172 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 TNFAIP8L1Q8WVP5 186 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 MGLLQ99685 303 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 TMED9Q9BVK6 235 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 NOX4Q9NPH5 578 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 NUP50Q9UKX7 468 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 KPTNQ9Y664 436 aa16.44■□□□□ 0.22
COL9A3-202ENST00000452372 TOX4O94842 621 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 HAND1O96004 215 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 CALCBP10092 127 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 CPEP16870 476 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 PTGFRP43088 359 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 METTL11BQ5VVY1 283 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 ELP2Q6IA86 826 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 SNX22Q96L94 193 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 TBX15Q96SF7 602 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 PCGF1Q9BSM1 259 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 SIRPDQ9H106 197 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 ELL3Q9HB65 397 aaPredicted RBP16.43■□□□□ 0.22
COL9A3-202ENST00000452372 ACOT13Q9NPJ3 140 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 GLS2Q9UI32 602 aa16.43■□□□□ 0.22
COL9A3-202ENST00000452372 SC5DO75845 299 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 FPR2P25090 351 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 DUSP1P28562 367 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 MTNR1BP49286 362 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 EMX1Q04741 257 aaPredicted RBP16.42■□□□□ 0.22
COL9A3-202ENST00000452372 INSL4Q14641 139 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 CDH26Q8IXH8 852 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 KIR3DL3Q8N743 410 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.42■□□□□ 0.22
COL9A3-202ENST00000452372 ASCC1Q8N9N2 400 aaKnown RBP16.42■□□□□ 0.22
COL9A3-202ENST00000452372 Q8NFD4 153 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 GSTK1Q9Y2Q3 226 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 LRRC42Q9Y546 428 aa16.42■□□□□ 0.22
COL9A3-202ENST00000452372 A0A1W2PQ09 198 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 TMEM82A0PJX8 343 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 MAGEA13PA6NCF6 341 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 SH2D1BO14796 132 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 MAS1P04201 325 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 IGHV4-38-2P0DP08 117 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 OR3A4PP47883 348 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 BMXP51813 675 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 GP2P55259 537 aaKnown RBP16.41■□□□□ 0.22
COL9A3-202ENST00000452372 SNU13P55769 128 aaKnown RBP16.41■□□□□ 0.22
COL9A3-202ENST00000452372 TRAM1Q15629 374 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 C17orf107Q6ZR85 190 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 C1orf122Q6ZSJ8 110 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 CMTM4Q8IZR5 234 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 SVOPQ8N4V2 548 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 OR5D13Q8NGL4 314 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 NKX3-1Q99801 234 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-202ENST00000452372 FAM192AQ9GZU8 254 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 OCEL1Q9H607 264 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 ONECUT1Q9UBC0 465 aa16.41■□□□□ 0.22
COL9A3-202ENST00000452372 A0A0A6YYJ9 748 aa16.4■□□□□ 0.22
COL9A3-202ENST00000452372 LMO1P25800 156 aa16.4■□□□□ 0.22
COL9A3-202ENST00000452372 RPL31P62899 125 aaKnown RBP16.4■□□□□ 0.22
COL9A3-202ENST00000452372 PDCD1Q15116 288 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms