RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 RGP1Q92546 391 aaPredicted RBP5.98□□□□□ -1.45
LINC01961-201ENST00000449954 TAMM41Q96BW9 452 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 KCTD7Q96MP8 289 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 FGF23Q9GZV9 251 aaPredicted RBP5.98□□□□□ -1.45
LINC01961-201ENST00000449954 GAL3ST2Q9H3Q3 398 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 VIPAS39Q9H9C1 493 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 PLEKHA3Q9HB20 300 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 PLEKHA1Q9HB21 404 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 B9D1Q9UPM9 204 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 SLC22A13Q9Y226 551 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 SH3GLB1Q9Y371 365 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 AMMECR1Q9Y4X0 333 aaPredicted RBP5.98□□□□□ -1.45
LINC01961-201ENST00000449954 N6AMT1Q9Y5N5 214 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 WSB1Q9Y6I7 421 aa5.98□□□□□ -1.45
LINC01961-201ENST00000449954 TRBV5-3A0A0A0MS03 114 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OR5B21A6NL26 309 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 ZNF878C9JN71 531 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 MPZL2O60487 215 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 NOS1APO75052 506 aaPredicted RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 ZNF737O75373 536 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 TPPPO94811 219 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 NXPH2O95156 264 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 IGKV1D-33P01593 117 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 IGKV1-33P01594 117 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 APOC1P02654 83 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 ANXA2P07355 339 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 CDKN2AP42771 156 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 SLC15A1P46059 708 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 GPR4P46093 362 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 RPS6KA3P51812 740 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 PRRX1P54821 245 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 CKAP4Q07065 602 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 TAF13Q15543 124 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 CYP51A1Q16850 503 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 HAGHLQ6PII5 290 aaPredicted RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 HEPN1Q6WQI6 88 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 ZBTB46Q86UZ6 589 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 RNF113BQ8IZP6 322 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OR8H3Q8N146 312 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 Q8N402 240 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 GVQW1Q8N7I0 195 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OR9I1Q8NGQ6 314 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 TRMT10AQ8TBZ6 339 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 SGK3Q96BR1 496 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 FLYWCH2Q96CP2 140 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OVOL2Q9BRP0 275 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 NSRP1Q9H0G5 558 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OR10A2Q9H208 303 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 KLK15Q9H2R5 256 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 IKZF5Q9H5V7 419 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 SCRT2Q9NQ03 307 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 VAPAQ9P0L0 249 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 OR14J1Q9UGF5 321 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 MRM2Q9UI43 246 aaKnown RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 BAG5Q9UL15 447 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 POLDIP2Q9Y2S7 368 aa5.97□□□□□ -1.45
LINC01961-201ENST00000449954 UBE2J1Q9Y385 318 aaPredicted RBP5.97□□□□□ -1.45
LINC01961-201ENST00000449954 IGHV4OR15-8A0A075B7B6 117 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 A0A087WW49 117 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 A0A1W2PPI3 338 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 FAM183AA6NL82 134 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 SMIM23A6NLE4 172 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 TRPC5OSA6NMA1 111 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 NCBP2LA6PVI3 153 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 ZNF732B4DXR9 585 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 CDC42EP2O14613 210 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 XRCC3O43542 346 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 MMP23AO75900 390 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 RENP00797 406 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 TFAP2AP05549 437 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 LGALS1P09382 135 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 PPIFP30405 207 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 GLIPR1P48060 266 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 CX3CR1P49238 355 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 RAB7AP51149 207 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 GRB2P62993 217 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 EWSR1Q01844 656 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 RBM39Q14498 530 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 EDDM3AQ14507 147 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 HNF4GQ14541 408 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 GFOD2Q3B7J2 385 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 CEACAM21Q3KPI0 293 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 DCXRQ7Z4W1 244 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 LYG2Q86SG7 212 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 TRAPPC6BQ86SZ2 158 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 LAX1Q8IWV1 398 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 PIGCQ92535 297 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 PRRC1Q96M27 445 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 SORT1Q99523 831 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 PARD6BQ9BYG5 372 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 TOLLIPQ9H0E2 274 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 ALX4Q9H161 411 aaPredicted RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 ZNF286AQ9HBT8 521 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 HES4Q9HCC6 221 aa5.96□□□□□ -1.46
LINC01961-201ENST00000449954 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
LINC01961-201ENST00000449954 A0A087X0M5 115 aa5.95□□□□□ -1.46
LINC01961-201ENST00000449954 A0A1B0GX30 115 aa5.95□□□□□ -1.46
LINC01961-201ENST00000449954 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
LINC01961-201ENST00000449954 J3QT63 122 aa5.95□□□□□ -1.46
LINC01961-201ENST00000449954 RTL8CO15255 209 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms