RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SELENOIQ9C0D9 397 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 MRPS28Q9Y2Q9 187 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 K7ERU9 68 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 CEACAM4O75871 244 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIAA0040Q15053 153 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPL22L1Q6P5R6 122 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR4A5Q8NH83 315 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 VGLL1Q99990 258 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PBOV1Q9GZY1 135 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 MED20Q9H944 212 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF222Q9UK12 451 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 AIREO43918 545 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TNFSF8P32971 234 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 C3orf36Q3SXR2 165 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF679Q8IYX0 411 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR56B1Q8NGI3 324 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 MCFD2Q8NI22 146 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PP6455Q8WZ26 134 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 RGP1Q92546 391 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 UPRTQ96BW1 309 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ITPKCQ96DU7 683 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SCP2D1Q9UJQ7 156 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SIRT4Q9Y6E7 314 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 DISC1C4P0D8 188 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TXNL1O43396 289 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CECR9P0C854 216 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMBIM6P55061 237 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAB40BQ12829 278 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF362Q5T0B9 420 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TFAP2EQ6VUC0 442 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC35E3Q7Z769 313 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CLVS1Q8IUQ0 354 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SIGLECL1Q8N7X8 197 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ADPRHL1Q8NDY3 354 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 DIRAS2Q96HU8 199 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CCL13Q99616 98 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNPEPL1Q9HAU8 725 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CEPT1Q9Y6K0 416 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 K7EM74 188 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ARPC3O15145 178 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 NUPL2O15504 423 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 AKR7A2O43488 359 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZIC3O60481 467 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SNCGO76070 127 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 PDGFAP04085 211 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CHRM2P08172 466 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 DUSP1P28562 367 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 GCAP28676 217 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAB11AP62491 216 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 FOXF2Q12947 444 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CCDC71LQ8N9Z2 235 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR52B4Q8NGK2 314 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2S2Q9NQN1 319 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 C19orf12Q9NSK7 152 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 LRRC3CA6NJW4 275 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF14P17017 642 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TBPP20226 339 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM27BQ5VT28 67 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM106AQ96A25 262 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CTHRC1Q96CG8 243 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 C4orf36Q96KX1 117 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ARHGDIGQ99819 225 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 MAGT1Q9H0U3 335 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SCPEP1Q9HB40 452 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ALPK3Q96L96 1907 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ARID2Q68CP9 1835 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM30CPA0ZSE6 113 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 C7orf72A4D263 438 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 A6NIN4 97 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 GMDSO60547 372 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 HPRP00739 348 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SUCLG1P53597 346 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 MS4A2Q01362 244 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 VAMP3Q15836 100 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR13A1Q8NGR1 328 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 MS4A3Q96HJ5 214 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ABHD6Q9BV23 337 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CMC2Q9NRP2 79 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 PLSCR4Q9NRQ2 329 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 LOC107986453A0A1B0GWG9 222 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 NOTOA8MTQ0 251 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 CDIPTO14735 213 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 DENRO43583 198 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 VAMP1P23763 118 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 RAP2BP61225 183 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC17A1Q14916 467 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 PCK2Q16822 640 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 FBXW12Q6X9E4 464 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR5H2Q8NGV7 314 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2AE1Q8NHA4 323 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM45BQ96B21 275 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SDSLQ96GA7 329 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 MOGAT1Q96PD6 335 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 ATP5SQ99766 215 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SRXN1Q9BYN0 137 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 LINC00470Q9BZP3 86 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 SEBOXQ9HB31 216 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms