RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MGST3O14880 152 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 PRKYO43930 277 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 RPP14O95059 124 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 HAND1O96004 215 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 OCM2P0CE71 109 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 OCMP0CE72 109 aaPredicted RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 CEACAM3P40198 252 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 RBP2P50120 134 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 GYS2P54840 703 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 CDC42P60953 191 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 KPNB1Q14974 876 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 UBE2V2Q15819 145 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 GID4Q8IVV7 300 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 ABHD12Q8N2K0 398 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 TCEANCQ8N8B7 351 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 SLAMF9Q96A28 289 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 CADM1Q9BY67 442 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 GPR61Q9BZJ8 451 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 GAL3ST2Q9H3Q3 398 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 LIN7BQ9HAP6 207 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 KRT84Q9NSB2 600 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 MRM2Q9UI43 246 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 UBE2J1Q9Y385 318 aaPredicted RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 PLXNB1O43157 2135 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 METTL15A6NJ78 407 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 LEUTXA8MZ59 168 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 PRR32B1ATL7 298 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 M0QZK8 103 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 TOR1AO14656 332 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 SH2D1BO14796 132 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 MAGEB4O15481 346 aaPredicted RBP10.66□□□□□ -0.7
HMGB3-204ENST00000448905 GYG2O15488 501 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 FKBP6O75344 327 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 SULT1C4O75897 302 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 OR2T7P0C7T2 308 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 T-ENOLP0DO92 83 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 CCL1P22362 96 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 ERP29P30040 261 aaKnown RBP10.66□□□□□ -0.7
HMGB3-204ENST00000448905 PRRX1P54821 245 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 FLOT2Q14254 428 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 AADACL4Q5VUY2 407 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 Q6ZS46 218 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 FAM58AQ8N1B3 248 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 DNAAF1Q8NEP3 725 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 TMEM163Q8TC26 289 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 PP6455Q8WZ26 134 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 DPF1Q92782 380 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 ADGRL4Q9HBW9 690 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
HMGB3-204ENST00000448905 WARS2Q9UGM6 360 aaKnown RBP10.66□□□□□ -0.7
HMGB3-204ENST00000448905 ENOPH1Q9UHY7 261 aa10.66□□□□□ -0.7
HMGB3-204ENST00000448905 TMEM82A0PJX8 343 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 F8VVB4 439 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 F8VWA3 439 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 PRKACBP22694 351 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 MNDAP41218 407 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 DAPP51397 102 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 MTCP1P56278 107 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 BDH1Q02338 343 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 SPIN3Q5JUX0 258 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 FAHD1Q6P587 224 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 PLEKHG7Q6ZR37 379 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 BCDIN3DQ7Z5W3 292 aaKnown RBP10.65□□□□□ -0.7
HMGB3-204ENST00000448905 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 IL4I1Q96RQ9 567 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 CHST5Q9GZS9 411 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 CHST6Q9GZX3 395 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
HMGB3-204ENST00000448905 E9PQ18 207 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 G3V2T6 193 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 OR2F2O95006 317 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 LPLP06858 475 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 FAM106CPP0CH98 169 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 DUSP1P28562 367 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 P2RX3P56373 397 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 EFNB1P98172 346 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
HMGB3-204ENST00000448905 ZNF146Q15072 292 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 DNAL1Q4LDG9 190 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 ABCA11PQ4W5N1 156 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 TPRX1Q8N7U7 411 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 OR52N4Q8NGI2 321 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 OR4D6Q8NGJ1 314 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 MYDGFQ969H8 173 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 RBM14Q96PK6 669 aaKnown RBP10.64□□□□□ -0.71
HMGB3-204ENST00000448905 TAS2R3Q9NYW6 316 aa10.64□□□□□ -0.71
HMGB3-204ENST00000448905 TRBV2A0A0J9YWF9 115 aa10.63□□□□□ -0.71
HMGB3-204ENST00000448905 A0A1W2PQL4 384 aaPredicted RBP10.63□□□□□ -0.71
HMGB3-204ENST00000448905 IGHA1P01876 353 aa10.63□□□□□ -0.71
HMGB3-204ENST00000448905 UBCP0CG48 685 aaKnown RBP10.63□□□□□ -0.71
HMGB3-204ENST00000448905 PRKACAP17612 351 aa10.63□□□□□ -0.71
HMGB3-204ENST00000448905 CDK2P24941 298 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms