RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 HIST1H3AP68431 136 aa8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 MESP2Q0VG99 397 aa8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 SP5Q6BEB4 398 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 MAML2Q8IZL2 1156 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 PLEKHF2Q9H8W4 249 aa8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 FOXJ2Q9P0K8 574 aa8.24□□□□□ -1.09
SYNPO2-204ENST00000448416 TRAV36DV7A0A075B6V5 113 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 PRRT4C9JH25 899 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF205O95201 554 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 TMEM225BP0DP42 221 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 BCL2P10415 239 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SGCBQ16585 318 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CDCP2Q5VXM1 449 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 NUFIP2Q7Z417 695 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 OR5AS1Q8N127 324 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CRIPAKQ8N1N5 446 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF248Q8NDW4 579 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 C16orf52Q8NHV5 167 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ADOQ96SZ5 270 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF665Q9H7R5 613 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 STARD5Q9NSY2 213 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CISD1Q9NZ45 108 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 NXT1Q9UKK6 140 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CISD3P0C7P0 127 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 DYNLT3P51808 116 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 FMODQ06828 376 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 TOMM20LQ6UXN7 152 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 TMEM252Q8N6L7 170 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ELL3Q9HB65 397 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF850A8MQ14 1090 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SERPINE3A8MV23 424 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 HNF1AP20823 631 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 LCN15Q6UWW0 184 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 MEX3BQ6ZN04 569 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ABHD12BQ7Z5M8 362 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 OR51G1Q8NGK1 321 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 OR1N1Q8NGS0 311 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 C18orf12Q96KH6 178 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 HEBP2Q9Y5Z4 205 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CEBPZOSA8MTT3 80 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 PHF1O43189 567 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 CHRNB4P30926 498 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 NKX2-1P43699 371 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF787Q6DD87 383 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SLC25A24Q6NUK1 477 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 C17orf99Q6UX52 265 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 RABEPKQ7Z6M1 372 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SLAMF6Q96DU3 332 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 FAM71F1Q96KD3 344 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF558Q96NG5 402 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SMIM7Q9BQ49 75 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 PCED1AQ9H1Q7 454 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 Q9N2K0 584 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SERINC1Q9NRX5 453 aa8.23□□□□□ -1.09
SYNPO2-204ENST00000448416 SSSCA1O60232 199 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 UMODP07911 640 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 CTGFP29279 349 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 ENDOGQ14249 297 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 PRSS8Q16651 343 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 ARMC6Q6NXE6 501 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 NUP54Q7Z3B4 507 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 FAM89BQ8N5H3 189 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 RNF133Q8WVZ7 376 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 HDHD3Q9BSH5 251 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 TBL1XR1Q9BZK7 514 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 PRSS50Q9UI38 385 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 PAM16Q9Y3D7 125 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 CCDC163A0A0D9SF12 145 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 CEACAM5P06731 702 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 PVRP15151 417 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 SEC13P55735 322 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 ZNF92Q03936 586 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 DNM1P34Q6PK57 102 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 H1FOOQ8IZA3 346 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 LRTM2Q8N967 370 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 C20orf144Q9BQM9 153 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 THAP10Q9P2Z0 257 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 ANXA10Q9UJ72 324 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 MCTS1Q9ULC4 181 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 HCFC2Q9Y5Z7 792 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 RRP8O43159 456 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 HCRTR2O43614 444 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 TNFSF13O75888 250 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 BSXQ3C1V8 233 aa8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 FBXO46Q6PJ61 603 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-204ENST00000448416 DPPA3Q6W0C5 159 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms