RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TMEM108Q6UXF1 575 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 DOK3Q7L591 496 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 MBNL1Q9NR56 388 aaKnown RBP8.24□□□□□ -1.09
SMC6-207ENST00000448223 P4HTMQ9NXG6 502 aa8.24□□□□□ -1.09
SMC6-207ENST00000448223 A0A1W2PQU0 124 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 DHRS7CA6NNS2 312 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 KCNAB3O43448 404 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 P2RY4P51582 365 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 NSDHLQ15738 373 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ZNF79Q15937 498 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 EXT1Q16394 746 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SSX8Q7RTT4 187 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 MISPQ8IVT2 679 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR8A1Q8NGG7 326 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ADTRPQ96IZ2 230 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 B4GALT7Q9UBV7 327 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ZNF217O75362 1048 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 CFDP00746 253 aaPredicted RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 FGF2P09038 288 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 TRGC1P0CF51 173 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 LBX1P52954 281 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 RBM11P57052 281 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 SP6Q3SY56 376 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 Q7L0L9 218 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 C16orf82Q7Z2V1 217 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 CISD2Q8N5K1 135 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR52E1Q8NGJ3 308 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SDHCQ99643 169 aaPredicted RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 MEGF9Q9H1U4 602 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 PARLQ9H300 379 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SLC2A4RGQ9NR83 387 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SLC17A5Q9NRA2 495 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SLC5A6Q9Y289 635 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 STARD10Q9Y365 291 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 A0A1W2PR48 441 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR4C46A6NHA9 309 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 EFSO43281 561 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 SPINT2O43291 252 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 RECKO95980 971 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 GUSBP08236 651 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 PNLIPRP2P54317 469 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 LRRC18Q8N456 261 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 PFN4Q8NHR9 129 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ADOQ96SZ5 270 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 VN1R1Q9GZP7 353 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 TECRQ9NZ01 308 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 LSM2Q9Y333 95 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 UNC80Q8N2C7 3258 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 IGHA2P01877 340 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 CPMP14384 443 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 RPS27P42677 84 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 NAAAQ02083 359 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 KHDC3LQ587J8 217 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ZNF660Q6AZW8 331 aaPredicted RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 DEGS2Q6QHC5 323 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 MRGPRGQ86SM5 289 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 ARHGEF39Q8N4T4 335 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 WNT2BQ93097 391 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 RCC2Q9P258 522 aaKnown RBP8.23□□□□□ -1.09
SMC6-207ENST00000448223 ZDHHC8Q9ULC8 765 aa8.23□□□□□ -1.09
SMC6-207ENST00000448223 HSPB2A8KAH6 182 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 APBB3O95704 486 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 HPP00738 406 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 MMP16P51512 607 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 SMAGPQ0VAQ4 97 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 HSPB2Q16082 182 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 FCRL6Q6DN72 434 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 ERASQ7Z444 233 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 RABEPKQ7Z6M1 372 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 WDFY1Q8IWB7 410 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 DEFB119Q8N690 84 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 RIMS4Q9H426 269 aaPredicted RBP8.22□□□□□ -1.09
SMC6-207ENST00000448223 GVINP1Q7Z2Y8 2422 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 GSTZ1O43708 216 aaPredicted RBP8.22□□□□□ -1.09
SMC6-207ENST00000448223 COX7A2P2O60397 106 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 COX6CP09669 75 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 LINC00614P0C842 121 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 SLC38A11Q08AI6 406 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 KLRB1Q12918 225 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 AGERQ15109 404 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 PHF19Q5T6S3 580 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 SPAG8Q99932 426 aaPredicted RBP8.22□□□□□ -1.09
SMC6-207ENST00000448223 OBP2BQ9NPH6 170 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 MTCH2Q9Y6C9 303 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 C17orf105B2RV13 164 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 POU3F2P20265 443 aaPredicted RBP8.22□□□□□ -1.09
SMC6-207ENST00000448223 SRP14P37108 136 aaKnown RBP8.22□□□□□ -1.09
SMC6-207ENST00000448223 EDDM3BP56851 147 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 SLC39A5Q6ZMH5 540 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 TMEM183AQ8IXX5 376 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 ST6GALNAC3Q8NDV1 305 aa8.22□□□□□ -1.09
SMC6-207ENST00000448223 CNRIP1Q96F85 164 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms