RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CCDC71LQ8N9Z2 235 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 OR5L1Q8NGL2 311 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 ISOC2Q96AB3 205 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 KCNJ16Q9NPI9 418 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF391Q9UJN7 358 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 KIAA1549Q9HCM3 1950 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 IGKV1-12A0A0C4DH73 117 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 C1QL1O75973 258 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 IGKV1D-12P01611 117 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 MAS1LP35410 378 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 SULT1A1P50225 295 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 RAB1AP62820 205 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 GUSBP11Q6P575 273 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 RBMS3Q6XE24 437 aaKnown RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF100Q8IYN0 542 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 OR1F12Q8NHA8 337 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 NANPQ8TBE9 248 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 SF3B5Q9BWJ5 86 aaKnown RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 C11orf1Q9H5F2 150 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 PROK2Q9HC23 129 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 RCL1Q9Y2P8 373 aaKnown RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 A0A1W2PPE3 182 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF14P17017 642 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 CCL7P80098 99 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 GNMTQ14749 295 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 PIGYQ3MUY2 71 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 KRBOX4Q5JUW0 171 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 DYRK2Q92630 601 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 BOD1Q96IK1 185 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 WDR54Q9H977 334 aa16.54■□□□□ 0.24
SDCBP-204ENST00000447182 MRPS17Q9Y2R5 130 aaKnown RBP16.54■□□□□ 0.24
SDCBP-204ENST00000447182 SHANK1Q9Y566 2161 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 SDK1Q7Z5N4 2213 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 PDCD6O75340 191 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 CDS2O95674 445 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 NRASP01111 189 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 RAC1P63000 192 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 TMEM211Q6ICI0 200 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 FBXL14Q8N1E6 418 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 HSD17B11Q8NBQ5 300 aa16.53■□□□□ 0.24
SDCBP-204ENST00000447182 AKIRIN1Q9H9L7 192 aaPredicted RBP16.53■□□□□ 0.24
SDCBP-204ENST00000447182 A0A0J9YW62 118 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 OR6C6A6NF89 314 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 LINC01387J3KSC0 135 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 PHF1O43189 567 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-204ENST00000447182 DNPH1O43598 174 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF806P0C7X5 589 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 CCL3P10147 92 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 SRPXP78539 464 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 EWSR1Q01844 656 aaKnown RBP eCLIP16.52■□□□□ 0.24
SDCBP-204ENST00000447182 FABP9Q0Z7S8 132 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 TGIF1Q15583 401 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF774Q6NX45 483 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 SLC35G3Q8N808 338 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 OR11L1Q8NGX0 322 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 CCDC74BQ96LY2 380 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 C20orf24Q9BUV8 137 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 PHF7Q9BWX1 381 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-204ENST00000447182 SH2D2AQ9NP31 389 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 ST3GAL6Q9Y274 331 aa16.52■□□□□ 0.24
SDCBP-204ENST00000447182 LY6G6EA0A0G2JKS1 128 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 LCATP04180 440 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 DAOP14920 347 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 TCN2P20062 427 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 FUT6P51993 359 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 CLINT1Q14677 625 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 SLC16A13Q7RTY0 426 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 FAM185AQ8N0U4 392 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 OR8G5Q8NG78 346 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 POM121Q96HA1 1249 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 DUSP23Q9BVJ7 150 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 PLSCR2Q9NRY7 297 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 DKKL1Q9UK85 242 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 FBXO7Q9Y3I1 522 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 U3KQA8 63 aa16.52■□□□□ 0.23
SDCBP-204ENST00000447182 IGHV1-45A0A0A0MS14 117 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 FAM221AA4D161 298 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 TNFSF11O14788 317 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 CELA2AP08217 269 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 CBR1P16152 277 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 HERV-K104P61576 105 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 MALLQ13021 153 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF266Q14584 549 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 BRICD5Q6PL45 260 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 C1QL4Q86Z23 238 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 OR2C3Q8N628 320 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 IMMP1LQ96LU5 166 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 TP53RKQ96S44 253 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 SRXN1Q9BYN0 137 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 TMEM38BQ9NVV0 291 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
SDCBP-204ENST00000447182 hCG_1809904A0A1W2PP81 198 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 A0A1W2PR64 198 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 A0A1W2PRV1 198 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 FABP1P07148 127 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 GLI4P10075 376 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 AADACP22760 399 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 PPP1CCP36873 323 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms