RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LYZL2Q7Z4W2 148 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ALKBH7Q9BT30 221 aaPredicted RBP7□□□□□ -1.29
SMG1-202ENST00000446231 AURKAIP1Q9NWT8 199 aaPredicted RBP7□□□□□ -1.29
SMG1-202ENST00000446231 OR51B4Q9Y5P0 310 aa7□□□□□ -1.29
SMG1-202ENST00000446231 F8VVB4 439 aa7□□□□□ -1.29
SMG1-202ENST00000446231 F8VWA3 439 aa7□□□□□ -1.29
SMG1-202ENST00000446231 MAJINQ3KP22 176 aa7□□□□□ -1.29
SMG1-202ENST00000446231 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 FLRT3Q9NZU0 649 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ECM29Q5VYK3 1845 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 GUSBP08236 651 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 GNG4P50150 75 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 HIST3H3Q16695 136 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 IP6K3Q96PC2 410 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 CHRDL1Q9BU40 450 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 CACNG5Q9UF02 275 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 PLPPR5Q32ZL2 321 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 C5orf66Q9H5L9 145 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 HLA-BQ31612 363 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 MRPS18BQ9Y676 258 aaKnown RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 LINC01387J3KSC0 135 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 CD5P06127 495 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 TRGC1P0CF51 173 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 FCER1GP30273 86 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 RSPO2Q6UXX9 243 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 OR10G4Q8NGN3 311 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 OR10G9Q8NGN4 311 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 OR10G7Q8NGN6 311 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 P4HTMQ9NXG6 502 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 PRSS38A1L453 326 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ATP6V0CP27449 155 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 RPEL1Q2QD12 228 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 C1QL3Q5VWW1 255 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 IFI44Q8TCB0 444 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 LRRC3BQ96PB8 259 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 OR6C3Q9NZP0 311 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 APOBEC1P41238 236 aaKnown RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 NUTF2P61970 127 aaKnown RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 HEYLQ9NQ87 328 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SLC2A8Q9NY64 477 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 KLHDC2Q9Y2U9 406 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 TRDCB7Z8K6 153 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SRYQ05066 204 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 DEFB119Q8N690 84 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 VN1R17PQ8TDU5 208 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SOX7Q9BT81 388 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 C6orf106Q9H6K1 298 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 UBR2Q8IWV8 1755 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 A0A1B0GU03 582 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 HIST3H2BBQ8N257 126 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ZPLD1Q8TCW7 415 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ZNF775Q96BV0 537 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ACRP10323 421 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 IER3P46695 156 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 KIR3DX1Q9H7L2 352 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ZNF468Q5VIY5 522 aaPredicted RBP6.99□□□□□ -1.29
SMG1-202ENST00000446231 DEFB132Q7Z7B7 95 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SGMS2Q8NHU3 365 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 ERGIC1Q969X5 290 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 MTCH2Q9Y6C9 303 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SOCS1O15524 211 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SPINK4O60575 86 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 GINS3Q9BRX5 216 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SLC25A22Q9H936 323 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 GYPAP02724 150 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 BMP5P22003 454 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 CA13Q8N1Q1 262 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 SLC39A11Q8N1S5 342 aa6.99□□□□□ -1.29
SMG1-202ENST00000446231 CRYAAP02489 173 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 GJA4P35212 333 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 OR10P1Q8NGE3 313 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 EMC6Q9BV81 110 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 CISD1Q9NZ45 108 aaKnown RBP6.98□□□□□ -1.29
SMG1-202ENST00000446231 MEX3AA1L020 520 aaKnown RBP6.98□□□□□ -1.29
SMG1-202ENST00000446231 FA2HQ7L5A8 372 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 OR6X1Q8NH79 312 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 CXorf51AA0A1B0GTR3 108 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 PRKNO60260 465 aaPredicted RBP6.98□□□□□ -1.29
SMG1-202ENST00000446231 KISS1Q15726 138 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 LIAT1Q6ZQX7 453 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 FBXO34Q9NWN3 711 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 RPS4Y1P22090 263 aaKnown RBP6.98□□□□□ -1.29
SMG1-202ENST00000446231 CCR2P41597 374 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HSPB8Q9UJY1 196 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 MARCH11A6NNE9 402 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 RRADP55042 308 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 CLDN15P56746 228 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 ZIC1Q15915 447 aa6.98□□□□□ -1.29
SMG1-202ENST00000446231 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms