RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 FAM57AQ8TBR7 257 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 HDHD3Q9BSH5 251 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 SFXN3Q9BWM7 321 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 C5orf66Q9H5L9 145 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 MTCH1Q9NZJ7 389 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 POLDIP2Q9Y2S7 368 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 PLSCR5A0PG75 271 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 OR5H1A6NKK0 313 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 SIX6O95475 246 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 IGLV1-44P01699 117 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 GLAP06280 429 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 NFYAP23511 347 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 C3P1Q6ZMU1 363 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 Q6ZS49 121 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 SEM1Q6ZVN7 128 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 ADAD2Q8NCV1 583 aaKnown RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 OPN3Q9H1Y3 402 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 OR51I2Q9H344 312 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 MSRB2Q9Y3D2 182 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 GVINP1Q7Z2Y8 2422 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.41□□□□□ -0.26
SNX13-204ENST00000444712 TMEM210A6NLX4 147 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 GFRA3O60609 400 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 SFT2D2O95562 160 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 CD8AP01732 235 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 OR5H8P0DN80 308 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 PGAM2P15259 253 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 TSC22D1Q15714 1073 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 DCAF12L2Q5VW00 463 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 COQ8AQ8NI60 647 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 GTF3AQ92664 365 aaKnown RBP13.41□□□□□ -0.26
SNX13-204ENST00000444712 EXTL1Q92935 676 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 ABHD17AQ96GS6 310 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 ZNF2Q9BSG1 426 aaPredicted RBP13.41□□□□□ -0.26
SNX13-204ENST00000444712 PDCD10Q9BUL8 212 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 RIMS4Q9H426 269 aaPredicted RBP13.41□□□□□ -0.26
SNX13-204ENST00000444712 DECR2Q9NUI1 292 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 COMMD9Q9P000 198 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 FAM215AQ9Y5M1 114 aa13.41□□□□□ -0.26
SNX13-204ENST00000444712 INTS1Q8N201 2190 aaKnown RBP13.41□□□□□ -0.26
SNX13-204ENST00000444712 MCRIP1C9JLW8 97 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 K7EM74 188 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 K7ENP7 123 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 L7N2F9 121 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 TSC22D2O75157 780 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 PRKACAP17612 351 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 C3orf36Q3SXR2 165 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 CCDC120Q96HB5 630 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 ADAT1Q9BUB4 502 aaKnown RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 CHMP1AQ9HD42 196 aaPredicted RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 IGKV1D-8A0A087WSZ0 117 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 OR5H14A6NHG9 310 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 M0R233 179 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 SYNGR1O43759 233 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 LILRA1O75019 489 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 CTSDP07339 412 aaPredicted RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 SPINK2P20155 84 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 GLP1RP43220 463 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 SEC61A1P61619 476 aaKnown RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 IKZF1Q13422 519 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 RBM39Q14498 530 aaKnown RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 FAM76BQ5HYJ3 339 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 SLC22A25Q6T423 547 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 FAM58AQ8N1B3 248 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
SNX13-204ENST00000444712 IFT22Q9H7X7 185 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 TP53TG5Q9Y2B4 290 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 ESPL1Q14674 2120 aa13.4□□□□□ -0.26
SNX13-204ENST00000444712 AGFG2O95081 481 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 CECR9P0C854 216 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 CALCRP30988 508 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 OPRM1P35372 400 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 CYCSP99999 105 aaKnown RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 TIMM23BQ5SRD1 257 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 ZNF324BQ6AW86 544 aaPredicted RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 KLF14Q8TD94 323 aaPredicted RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 TMEM230Q96A57 120 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 ELMOD3Q96FG2 381 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 MARS2Q96GW9 593 aaKnown RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 CYYR1Q96J86 154 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 ZNF581Q9P0T4 197 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 CEP250Q9BV73 2442 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 DBX1A6NMT0 343 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 POM121CA8CG34 1229 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 CEACAM8P31997 349 aaPredicted RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 PSG7Q13046 419 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 OR8G1Q15617 311 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 ZNF718Q3SXZ3 478 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 ZNF660Q6AZW8 331 aaPredicted RBP13.39□□□□□ -0.27
SNX13-204ENST00000444712 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms