RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 A0A0U1RQV1 116 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 DHRS7CA6NNS2 312 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 C12orf77C9JDV5 145 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 LINC01619G3V211 115 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 C15orf65H3BRN8 121 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 K7ENP7 123 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ARPC5O15511 151 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 S1PR2O95136 353 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 HPNP05981 417 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 EIF4EP06730 217 aaKnown RBP3.51□□□□□ -1.85
VPS50-206ENST00000443443 HCKP08631 526 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 MMP7P09237 267 aaPredicted RBP3.51□□□□□ -1.85
VPS50-206ENST00000443443 CT45A10P0DMU9 189 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 TAC1P20366 129 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 VDAC1P21796 283 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 HIST1H1TP22492 207 aaPredicted RBP3.51□□□□□ -1.85
VPS50-206ENST00000443443 TSPOP30536 169 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 KLK7P49862 253 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 TAS2R43P59537 309 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 SNAP25P60880 206 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 NAA20P61599 178 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 SELENOTP62341 195 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ESRRGP62508 458 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 PSPHP78330 225 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 FKBP3Q00688 224 aaKnown RBP3.51□□□□□ -1.85
VPS50-206ENST00000443443 MICAQ29983 383 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 OTPQ5XKR4 325 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 KCTD16Q68DU8 428 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 SPNS3Q6ZMD2 512 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 FAM220AQ7Z4H9 259 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 GALNT10Q86SR1 603 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ZNF561Q8N587 486 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 UBL4BQ8N7F7 174 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 OR4P4Q8NGL7 312 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 OR2A12Q8NGT7 310 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 OR13D1Q8NGV5 346 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 NEIL3Q8TAT5 605 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 SLC37A2Q8TED4 501 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 RXFP2Q8WXD0 754 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 MED18Q9BUE0 208 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 MIXL1Q9H2W2 232 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 C11orf49Q9H6J7 331 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 VSIRQ9H7M9 311 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ISG20L2Q9H9L3 353 aaKnown RBP3.51□□□□□ -1.85
VPS50-206ENST00000443443 SIGLEC9Q9Y336 463 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 PRELID3BQ9Y3B1 194 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 CCDC144AA2RUR9 1427 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ARHGEF10O15013 1369 aa3.51□□□□□ -1.85
VPS50-206ENST00000443443 ERCC6Q03468 1493 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 TRAV39A0A0B4J263 110 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 MIF4GDA9UHW6 222 aaKnown RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 TRIM49D1C9J1S8 452 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 I3L4J1 428 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 J3QT63 122 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 BHLHE40O14503 412 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 XKRYO14609 159 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 AGPAT2O15120 278 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 SLC31A2O15432 143 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 CA11O75493 328 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 FOXH1O75593 365 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 REM1O75628 298 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR7C1O76099 320 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 ATG12O94817 140 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 MOSP00540 346 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR5H8P0DN80 308 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR13C7P0DN81 318 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 CD79AP11912 226 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 MYCNOSP40205 109 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 RAB2AP61019 212 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 RBX1P62877 108 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 GNG3P63215 75 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 HIST1H3AP68431 136 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 HBG1P69891 147 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 HBG2P69892 147 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 SLC35A2P78381 396 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 H3F3AP84243 136 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 PRDX1Q06830 199 aaKnown RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 SLC10A1Q14973 349 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 RSU1Q15404 277 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 LTB4RQ15722 352 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 TRMT12Q53H54 448 aaKnown RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 CLEC12AQ5QGZ9 265 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 ANKRD22Q5VYY1 191 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR10K2Q6IF99 312 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 SMARCD3Q6STE5 483 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 HIST2H3AQ71DI3 136 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 GLT6D1Q7Z4J2 308 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 C9orf40Q8IXQ3 194 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR1L8Q8NGR8 309 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR13C6PQ8NH95 151 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 MCFD2Q8NI22 146 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 LRRC29Q8WV35 223 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 SKA2Q8WVK7 121 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 CHCHD10Q8WYQ3 142 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 YIPF5Q969M3 257 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 MARC2Q969Z3 335 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms