RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SLC18B1Q6NT16 456 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAHD2BQ6P2I3 314 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 C1orf87Q8N0U7 546 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ASB10Q8WXI3 467 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 DVL3Q92997 716 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAHD2AQ96GK7 314 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ABHD6Q9BV23 337 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 MRPL13Q9BYD1 178 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 CBLN4Q9NTU7 201 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 TREM2Q9NZC2 230 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 B3GAT1Q9P2W7 334 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 PRELID1Q9Y255 219 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM14AQ9Y6G1 99 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 PRR14LQ5THK1 2151 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 KRBOX1C9JBD0 128 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 F5H5P2 479 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 RBBP9O75884 186 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 GRPP07492 148 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 MGMTP16455 207 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 NAAAQ02083 359 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 MAPK1IP1LQ8NDC0 245 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ST8SIA4Q92187 359 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR10A2Q9H208 303 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC25A32Q9H2D1 315 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 PNRC2Q9NPJ4 139 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 TAS2R4Q9NYW5 299 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 L7N2F9 121 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 GOSR2O14653 212 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 TOR1AO14656 332 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 IFNA2P01563 188 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC2A1P11166 492 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 RPS2P15880 293 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 LMO1P25800 156 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 DHRS2Q13268 280 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 HIST3H3Q16695 136 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 MST1LQ2TV78 715 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF774Q6NX45 483 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF611Q8N823 705 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 C1orf162Q8NEQ5 155 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 MICU1Q9BPX6 476 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 PAPOLGQ9BWT3 736 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 LIME1Q9H400 295 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 R4GMQ9 66 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF716A6NP11 495 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM14DPA8MWL7 114 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM157AC9JC47 383 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 CECR9P0C854 216 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM157CP0CG43 387 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 FOXG1P55316 489 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 TNFAIP6P98066 277 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 GK2Q14410 553 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 CDSNQ15517 529 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC22A6Q4U2R8 563 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 STOML3Q8TAV4 291 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 MITD1Q8WV92 249 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF133Q8WVZ7 376 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 PIGCQ92535 297 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 NEUROG1Q92886 237 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM71F1Q96KD3 344 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF126Q9BV68 326 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 GDF2Q9UK05 429 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCNS2Q9ULS6 477 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 EML6Q6ZMW3 1958 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 MAST4O15021 2626 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 DPRXA6NFQ7 191 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ARPC5O15511 151 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 PLATP00750 562 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF20P17024 532 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ALDH3B1P43353 468 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RIDAP52758 137 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 PPP1CBP62140 327 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RAB11BQ15907 218 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ABLIM2Q6H8Q1 611 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 SPNS3Q6ZMD2 512 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF676Q8N7Q3 588 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 DMBX1Q8NFW5 382 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ST8SIA2Q92186 375 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM230Q96A57 120 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 ADGRG7Q96K78 797 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC25A21Q9BQT8 299 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 GPN1Q9HCN4 374 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM38BQ9NVV0 291 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 RDH8Q9NYR8 311 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 CYB5R1Q9UHQ9 305 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC7A11Q9UPY5 501 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR2AT4A6NND4 320 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 SYNGR3O43761 229 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 SERPINA5P05154 406 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 CCL1P22362 96 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 MMP16P51512 607 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 GNB2P62879 340 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR8G1Q15617 311 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM57BQ71RH2 274 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms