RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GABREP78334 506 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 TRA2AQ13595 282 aaKnown RBP eCLIP7.48□□□□□ -1.21
HPS4-206ENST00000439453 SLC25A24Q6NUK1 477 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 BEND4Q6ZU67 534 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 OOSP2Q86WS3 158 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 OR10A2Q9H208 303 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.48□□□□□ -1.21
HPS4-206ENST00000439453 LOXL2Q9Y4K0 774 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 BLACEA4D250 179 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 OR5H15A6NDH6 313 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 TLCD2A6NGC4 264 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 A6NIZ1 184 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 OR5H1A6NKK0 313 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 ZNF724A8MTY0 619 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 K7N7A8 449 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 PGCP20142 388 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 ERVFRD-1P60508 538 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 RAP1BP61224 184 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 GPR157Q5UAW9 335 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 APCDD1LQ8NCL9 501 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 OR51T1Q8NGJ9 327 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 SNIP1Q8TAD8 396 aaKnown RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 CRYM-AS1A6NIL9 109 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 XRCC2O43543 280 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 PTBP3O95758 552 aaKnown RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 HCKP08631 526 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 FABP4P15090 132 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 POLR2HP52434 150 aaKnown RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 SPCS3P61009 180 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 PRTGQ2VWP7 1150 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 WDFY1Q8IWB7 410 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 METTL27Q8N6F8 245 aaPredicted RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 ASB10Q8WXI3 467 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 C5orf34Q96MH7 638 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 GPER1Q99527 375 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
HPS4-206ENST00000439453 ANKRD11Q6UB99 2663 aaPredicted RBP7.48□□□□□ -1.21
HPS4-206ENST00000439453 HSD17B6O14756 317 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 TOX3O15405 576 aaPredicted RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 CYB5BO43169 146 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 TIAF1O95411 115 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 AHSA1O95433 338 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 DIRAS3O95661 229 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 TRGC2P03986 189 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 CTSDP07339 412 aaPredicted RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 IL11P20809 199 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 SLC37A1P57057 533 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 CCL20P78556 96 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 HIST2H3PS2Q5TEC6 136 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 OR2T2Q6IF00 324 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 DAZLQ92904 295 aaKnown RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 ZNF2Q9BSG1 426 aaPredicted RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 SOX7Q9BT81 388 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 ZNF878C9JN71 531 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 NPIPA5E9PKD4 350 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 HPNP05981 417 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 KLK2P20151 261 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 DLK1P80370 383 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 NHLH2Q02577 135 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 OR10AD1Q8NGE0 317 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 OR10S1Q8NGN2 331 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 OR13D1Q8NGV5 346 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 C11orf40Q8WZ69 217 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 PNO1Q9NRX1 252 aaKnown RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 NPIPA1Q9UND3 350 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 ACACBO00763 2458 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 H0YL77 283 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 FOLR1P15328 257 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 BLVRBP30043 206 aaPredicted RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 ECI1P42126 302 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 HSD17B7P56937 341 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 HAGHQ16775 308 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 PLXDC1Q8IUK5 500 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 D2HGDHQ8N465 521 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 ADAMTS18Q8TE60 1221 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 PTPMT1Q8WUK0 201 aaPredicted RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 MISP3Q96FF7 219 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 GAL3ST4Q96RP7 486 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 PECRQ9BY49 303 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 ZNF700Q9H0M5 742 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 RCL1Q9Y2P8 373 aaKnown RBP7.47□□□□□ -1.21
HPS4-206ENST00000439453 KCNIP3Q9Y2W7 256 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 APC2O95996 2303 aa7.47□□□□□ -1.21
HPS4-206ENST00000439453 IGKV1D-8A0A087WSZ0 117 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 FRG2CA6NGY1 282 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 B4E171 279 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 TSPAN7P41732 249 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 C1orf189Q5VU69 101 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 ZNF429Q86V71 674 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 M1APQ8TC57 530 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 OR8D2Q9GZM6 311 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms