RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CD200R1LQ6Q8B3 271 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 MDP1Q86V88 176 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 WDSUB1Q8N9V3 476 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 MRPS24Q96EL2 167 aaKnown RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 IGHV3-43A0A0B4J1X8 118 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 LOC101059948A0A1B0GTJ6 334 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RFPL4AA6NLU0 287 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RFPL4AL1F8VTS6 287 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 TAAR5O14804 337 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RAMP1O60894 148 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 IGHV3-43DP0DP04 118 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 SKA3Q8IX90 412 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 TMEM231Q9H6L2 316 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 TREM2Q9NZC2 230 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 ZFHX2Q9C0A1 2572 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RGS13O14921 159 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 PIN1P1O15428 100 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 ZBTB25P24278 435 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 CD80P33681 288 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 BHLHA15Q7RTS1 189 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RBMXL3Q8N7X1 1067 aaKnown RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 NXF2Q9GZY0 626 aaKnown RBP10.77□□□□□ -0.69
TCOF1-205ENST00000439160 MSL2Q9HCI7 577 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 RPH3ALQ9UNE2 315 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 LHFPL6Q9Y693 200 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 TRAV39A0A0B4J263 110 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 M0R1X1 148 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 HEXAP06865 529 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 DEFA4P12838 97 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF250P15622 560 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 LCN15Q6UWW0 184 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 RBMS3Q6XE24 437 aaKnown RBP10.76□□□□□ -0.69
TCOF1-205ENST00000439160 Q6ZRG5 221 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF519Q8TB69 540 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 MRGPRDQ8TDS7 321 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 HGDQ93099 445 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SLC26A1Q9H2B4 701 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 CYB5BO43169 146 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ADRB1P08588 477 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 RFPL3SP0C7P2 107 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 OR13C7P0DN81 318 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 OR3A1P47881 315 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ASCL1P50553 236 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 TNFAIP6P98066 277 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-205ENST00000439160 TMEM88Q6PEY1 159 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SLC25A47Q6Q0C1 308 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SLC25A40Q8TBP6 338 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SSX3Q99909 188 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 OR2J1Q9GZK6 312 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ABCD4O14678 606 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SFT2D2O95562 160 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 IFITM2Q01629 132 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 DHODHQ02127 395 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 FAM122BQ7Z309 247 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 DYRK2Q92630 601 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 GMPPAQ96IJ6 420 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-205ENST00000439160 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
TCOF1-205ENST00000439160 ADAM10O14672 748 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ACP1P24666 158 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 CHRNB4P30926 498 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 KLF9Q13886 244 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF362Q5T0B9 420 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 OR10P1Q8NGE3 313 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 C10orf35Q96D05 121 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 PIGMQ9H3S5 423 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 AK3Q9UIJ7 227 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 PSG11Q9UQ72 335 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 OR5AC1P0C628 307 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 BCL3P20749 454 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 PDZK1IP1Q13113 114 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RAB32Q13637 225 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 H3F3CQ6NXT2 135 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 THNSL2Q86YJ6 484 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 C17orf78Q8N4C9 275 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ZNRF4Q8WWF5 429 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 PURGQ9UJV8 347 aaKnown RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 CHCHD2Q9Y6H1 151 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 NOTCH4Q99466 2003 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 DUS4LO95620 317 aaKnown RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RPS10P46783 165 aaKnown RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 GNB1P62873 340 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ZFP82Q8N141 532 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 CHAC2Q8WUX2 184 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 COMMD5Q9GZQ3 224 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RCL1Q9Y2P8 373 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms