RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AHSPQ9NZD4 102 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PSMC3IPQ9P2W1 217 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 SPRR3Q9UBC9 169 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CTSFQ9UBX1 484 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 LGALS13Q9UHV8 139 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 IKZF2Q9UKS7 526 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 VANGL2Q9ULK5 521 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 STAP1Q9ULZ2 295 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PACSIN2Q9UNF0 486 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 POLDIP2Q9Y2S7 368 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 SNX24Q9Y343 169 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PEX16Q9Y5Y5 336 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRGV5A0A0B4J1U4 118 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SMCO3A2RU48 225 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CCDC182A6NF36 153 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SAGE2PA6NJ88 616 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 HACD1B0YJ81 288 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 APOC4-APOC2K7ER74 178 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 FOXE1O00358 373 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 DLGAP1O14490 977 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CHST1O43916 411 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SUPT7LO94864 414 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 LALBAP00709 142 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGKV1-17P01599 117 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGHG4P01861 327 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 APOC2P02655 101 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SERPINE2P07093 398 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 HSMCR30P0CW71 290 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CXCL8P10145 99 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MLNP12872 115 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ICAM2P13598 275 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ATP1B2P14415 290 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ETS2P15036 469 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF43P17038 809 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPRR2EP22531 72 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 WARSP23381 471 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 KDELR1P24390 212 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRDX3P30048 256 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MIPP30301 263 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RPL22P35268 128 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPRR2BP35325 72 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPRR2AP35326 72 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAGEA5P43359 124 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 KIR2DS2P43631 304 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 HAAOP46952 286 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MARCKSL1P49006 195 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CYB561P49447 251 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 KPNA2P52292 529 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 BLVRAP53004 296 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RAB10P61026 200 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TFAMQ00059 246 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CDK16Q00536 496 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC25A11Q02978 314 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 BSPH1Q075Z2 132 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RGS1Q08116 209 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF154Q13106 437 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 DPYSL3Q14195 570 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ITIH4Q14624 930 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZSCAN26Q16670 478 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RGS21Q2M5E4 152 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 PTPN20Q4JDL3 420 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR4F3Q6IEY1 312 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2A2Q6IF42 318 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPOPLQ6IQ16 392 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 DNAJC24Q6P3W2 148 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 DCUN1D2Q6PH85 259 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ULK3Q6PHR2 472 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZFP2Q6ZN57 461 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 GDPD3Q7L5L3 318 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRSS41Q7RTY9 318 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 APRG1Q8IVJ8 170 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 SKA3Q8IX90 412 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRSS58Q8IYP2 241 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM61Q8N0U2 210 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM123Q8N131 208 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM86AQ8N2M4 240 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MTURNQ8N3F0 131 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 C17orf78Q8N4C9 275 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ASCC1Q8N9N2 400 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 C15orf53Q8NAA6 179 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 STXBP6Q8NFX7 210 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR1L4Q8NGR5 311 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR1F12Q8NHA8 337 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RHEBL1Q8TAI7 183 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 NEIL3Q8TAT5 605 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF596Q8TC21 504 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ACTL9Q8TC94 416 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 LRRC20Q8TCA0 184 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TRUB1Q8WWH5 349 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RPL3LQ92901 407 aaKnown RBP1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 MYDGFQ969H8 173 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 NEIL2Q969S2 332 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 C10orf35Q96D05 121 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 ASB9Q96DX5 294 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 PELI1Q96FA3 418 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 CERS2Q96G23 380 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM101Q96IK0 257 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 AMDHD1Q96NU7 426 aa1.46□□□□□ -2.18
HMGB1P18-201ENST00000438801 RNF157Q96PX1 679 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms