RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CLN6Q9NWW5 311 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 COPS3Q9UNS2 423 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 TET2Q6N021 2002 aaPredicted RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 MEX3AA1L020 520 aaKnown RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 A6NIN4 97 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 K7N7A8 449 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 M0R129 80 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 PRKYO43930 277 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 INMTO95050 263 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 CLIC3O95833 236 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 PF4P02776 101 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 AZGP1P25311 298 aaKnown RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 PEX2P28328 305 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ACTA2P62736 377 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ACTG2P63267 376 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ACTC1P68032 377 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ACTA1P68133 377 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 MEF2CQ06413 473 aaPredicted RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 HABP2Q14520 560 aaPredicted RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 PTGES3Q15185 160 aaKnown RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 GRK1Q15835 563 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 KHDC1LQ5JSQ8 128 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 MINOS1Q5TGZ0 78 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 NXNL2Q5VZ03 156 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ZNF626Q68DY1 528 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 TMEM42Q69YG0 159 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 PLEKHG7Q6ZR37 379 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 SLC25A26Q70HW3 274 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ZNF676Q8N7Q3 588 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 TCEANCQ8N8B7 351 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 CCDC54Q8NEL0 328 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 OR10H4Q8NGA5 316 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 TMEM163Q8TC26 289 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 SLAMF9Q96A28 289 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 IL4I1Q96RQ9 567 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 TBX5Q99593 518 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 CADM1Q9BY67 442 aaKnown RBP6.27□□□□□ -1.41
VPS50-204ENST00000438395 ZNF702PQ9H963 129 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 ADGRL4Q9HBW9 690 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 C19orf73Q9NVV2 129 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 NECAP2Q9NVZ3 263 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 HILPDAQ9Y5L2 63 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 LINC00312Q9Y6C7 94 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 SESN1Q9Y6P5 492 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 MINOS1-NBL1R4GNA1 71 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 V9GYS6 101 aa6.27□□□□□ -1.41
VPS50-204ENST00000438395 TRGV10A0A0A0MS01 117 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 LOC107986453A0A1B0GWG9 222 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 FUOMA2VDF0 154 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 A6NDX4 124 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 FAM90A8PA6NJQ4 464 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 C17orf98A8MV24 154 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 ODF3BA8MYP8 253 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 PRR32B1ATL7 298 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 G3V2T6 193 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 H3BSH0 61 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 MAGEB4O15481 346 aaPredicted RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 HAND1O96004 215 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 IGLV3-1P01715 115 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 UBCP0CG48 685 aaKnown RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 CD28P10747 220 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 ZNF20P17024 532 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 PRKACBP22694 351 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 HTR1DP28221 377 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 BRS3P32247 399 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 POU3F4P49335 361 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 RAB13P51153 203 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 DYNLT3P51808 116 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 FUT6P51993 359 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 ATP1B3P54709 279 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 LOXL3P58215 753 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 MLANAQ16655 118 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 HIST2H2BDQ6DRA6 164 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 OR52W1Q6IF63 320 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 FAHD1Q6P587 224 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 CRIP3Q6Q6R5 217 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 Q6ZPA2 131 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 BCDIN3DQ7Z5W3 292 aaKnown RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 Q8N2B8 174 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 OR11H6Q8NGC7 330 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 OR14K1Q8NGZ2 314 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 PP6455Q8WZ26 134 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 RFKQ969G6 155 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 AJUBAQ96IF1 538 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 SNX22Q96L94 193 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 CITED2Q99967 270 aaPredicted RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 CHST5Q9GZS9 411 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 MMP28Q9H239 520 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 GAL3ST2Q9H3Q3 398 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 NEK6Q9HC98 313 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 HES4Q9HCC6 221 aa6.26□□□□□ -1.41
VPS50-204ENST00000438395 WARS2Q9UGM6 360 aaKnown RBP6.26□□□□□ -1.41
VPS50-204ENST00000438395 MRM2Q9UI43 246 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms