RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CDK5R1Q15078 307 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 LILRB4Q8NHJ6 448 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 MRGPRDQ8TDS7 321 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 SLC2A9Q9NRM0 540 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 IFNL4K9M1U5 179 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF32P17041 273 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 PI3P19957 117 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 C11orf91Q3C1V1 193 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 METTL26Q96S19 204 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 SLC25A19Q9HC21 320 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 TRIM77I1YAP6 450 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 CST7O76096 145 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 IGHA1P01876 353 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 IGHA2P01877 340 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 GP1BAP07359 652 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ACAA1P09110 424 aaPredicted RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 COX6CP09669 75 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 FZD5Q13467 585 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 FAM109BQ6ICB4 259 aaPredicted RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 OR52M1Q8NGK5 317 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 OR2J1Q9GZK6 312 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 PARD6AQ9NPB6 346 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 NTMQ9P121 344 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 RGPD5Q99666 1765 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 KIAA1324LA8MWY0 1029 aaPredicted RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 UPK1AO00322 258 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 P01737 135 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ACAA2P42765 397 aaKnown RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 HIST1H3AP68431 136 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 KISS1Q15726 138 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 C20orf196Q8IYI0 205 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ISL2Q96A47 359 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 HSPB8Q9UJY1 196 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 LRP12Q9Y561 859 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 F5P12259 2224 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 GUK1Q16774 197 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 BAP18Q8IXM2 172 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 SGK494Q96LW2 274 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF815PA8K554 130 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 CTSLP07711 333 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 RAC3P60763 192 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 COX19Q49B96 90 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 NFAM1Q8NET5 270 aaPredicted RBP9.96□□□□□ -0.81
SCN4A-201ENST00000435607 DCTN5Q9BTE1 182 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 TBX21Q9UL17 535 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 ESPL1Q14674 2120 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 M0R143 59 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 MFNGO00587 321 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 COL9A3Q14050 684 aaPredicted RBP9.96□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.81
SCN4A-201ENST00000435607 ARRDC5A6NEK1 342 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 Q6ZS52 159 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 ZIC5Q96T25 663 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 NIT2Q9NQR4 276 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 EPPINO95925 133 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 COL8A1P27658 744 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
SCN4A-201ENST00000435607 OR13F1Q8NGS4 319 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 OTOSQ8NHW6 89 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 CDX2Q99626 313 aaPredicted RBP9.96□□□□□ -0.82
SCN4A-201ENST00000435607 C19orf43Q9BQ61 176 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 MMP24Q9Y5R2 645 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 CHD2O14647 1828 aaKnown RBP9.96□□□□□ -0.82
SCN4A-201ENST00000435607 UNC13CQ8NB66 2214 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 ZC3H12DA2A288 527 aaKnown RBP9.96□□□□□ -0.82
SCN4A-201ENST00000435607 PRSS44E7EML9 344 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 SPINK14Q6IE38 97 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 SLC17A5Q9NRA2 495 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
SCN4A-201ENST00000435607 VIRMAQ69YN4 1812 aaKnown RBP9.95□□□□□ -0.82
SCN4A-201ENST00000435607 A0A1B0GUH1 482 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 SMPD2O60906 423 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 FABP4P15090 132 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF774Q6NX45 483 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 OLIG3Q7RTU3 272 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 FCN1O00602 326 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 SLC7A5P1Q8MH63 180 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF561Q8N587 486 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 OR4P4Q8NGL7 312 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 TRAV1-2A0A0B4J238 106 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 HAND1O96004 215 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 CLDN18P56856 261 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 STARD4Q96DR4 205 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV1OR21-1A0A087WYE8 117 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 GPNMBQ14956 572 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 CLEC12BQ2HXU8 276 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 C16orf92Q96LL3 132 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ZBTB42B2RXF5 422 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 CXCL10P02778 98 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 OPN1MWP04001 364 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 OPN1MW2P0DN77 364 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 OPN1MW3P0DN78 364 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 LIMK1P53667 647 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms