RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SCN3BQ9NY72 215 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 SIRT4Q9Y6E7 314 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-207ENST00000435455 DSCAML1Q8TD84 2053 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 CLDN34H7C241 214 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 ANGPTL7O43827 346 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 HAND1O96004 215 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 EEF1B2P24534 225 aaKnown RBP13.35□□□□□ -0.27
SMPD4-207ENST00000435455 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-207ENST00000435455 WNT4P56705 351 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF146Q15072 292 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 NCR3LG1Q68D85 454 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 OR5D18Q8NGL1 313 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 GHSRQ92847 366 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 MYDGFQ969H8 173 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 ZDHHC16Q969W1 377 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 SLC25A28Q96A46 364 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 C19orf12Q9NSK7 152 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 ERGIC3Q9Y282 383 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 SOX21Q9Y651 276 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-207ENST00000435455 TENM1Q9UKZ4 2725 aa13.35□□□□□ -0.27
SMPD4-207ENST00000435455 hCG_1809904A0A1W2PP81 198 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 A0A1W2PPE2 198 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 A0A1W2PR64 198 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 A0A1W2PRV1 198 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF737O75373 536 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 KDM4BO94953 1096 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 CDK1P06493 297 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 TMEM225BP0DP42 221 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 MYF6P23409 242 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 PPP3R1P63098 170 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 RNLSQ5VYX0 342 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 CRIP3Q6Q6R5 217 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 GDPD3Q7L5L3 318 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 OR8H2Q8N162 312 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 NANOGP1Q8N7R0 232 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 GPER1Q99527 375 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
SMPD4-207ENST00000435455 IGKV1-12A0A0C4DH73 117 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 TRBV5-5A0A0J9YX44 114 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 MDFIC2A0A1B0GVS7 189 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 RNASEK-C17orf49H0YIS7 233 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 SH2D1BO14796 132 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 ALDOBP05062 364 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 CD1AP06126 327 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
SMPD4-207ENST00000435455 GABRR1P24046 479 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 BMXP51813 675 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 UBE2E1P51965 193 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 ZP1P60852 638 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 RIPK1Q13546 671 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 Q499Y3 187 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 C17orf107Q6ZR85 190 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 RNF144BQ7Z419 303 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 SATL1Q86VE3 508 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 PDZD9Q8IXQ8 264 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 ZFP41Q8N8Y5 198 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 PXT1Q8NFP0 134 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 OR4M1Q8NGD0 313 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 PPP1R35Q8TAP8 253 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 GCDHQ92947 438 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-207ENST00000435455 TNFRSF14Q92956 283 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-207ENST00000435455 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 MND1Q9BWT6 205 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 EXOSC4Q9NPD3 245 aaKnown RBP13.33□□□□□ -0.28
SMPD4-207ENST00000435455 TMEM138Q9NPI0 162 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 FAM96BQ9Y3D0 163 aa13.33□□□□□ -0.28
SMPD4-207ENST00000435455 TMEM82A0PJX8 343 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 NPFFO15130 113 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 DUSP1P28562 367 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
SMPD4-207ENST00000435455 EDDM3BP56851 147 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 BDH1Q02338 343 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-207ENST00000435455 KLRD1Q13241 179 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 SLC9A3R2Q15599 337 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 ASPHD2Q6ICH7 369 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 Q6YL49 198 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 OR51A2Q8NGJ7 313 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 THRSPQ92748 146 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 PGLYRP3Q96LB9 341 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 CDCA4Q9BXL8 241 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 HEXA-AS1Q9H8Q6 139 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 CKLFQ9UBR5 152 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
SMPD4-207ENST00000435455 PNMA8CA0A1B0GUJ8 204 aa13.31□□□□□ -0.28
SMPD4-207ENST00000435455 TMEM89A2RUT3 159 aa13.31□□□□□ -0.28
SMPD4-207ENST00000435455 MGST3O14880 152 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms