RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CCL17Q92583 94 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 FRZBQ92765 325 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 MRAP2Q96G30 205 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 GPR82Q96P67 336 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 DERL3Q96Q80 235 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 SPIN2AQ99865 258 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 APOL4Q9BPW4 351 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 SPIN2BQ9BPZ2 258 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 MRPL20Q9BYC9 149 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ULBP1Q9BZM6 244 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 SLC25A31Q9H0C2 315 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PRORYQ9H606 182 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 LHX9Q9NQ69 397 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 C21orf62Q9NYP8 219 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 DNAJC27Q9NZQ0 273 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 TFR2Q9UP52 801 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 NOSIPQ9Y314 301 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 YTHDF2Q9Y5A9 579 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ELP1O95163 1332 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 BAZ2AQ9UIF9 1905 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGKV1-6A0A0C4DH72 117 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 LOC389332A0A1B0GUA5 103 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 A0A1B0GXF2 115 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 GOLGA8IPA6NC78 632 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF233A6NK53 670 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 F8VZ95 297 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 PLPP3O14495 311 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ATP8B1O43520 1251 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR2A4O95047 310 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 MPZL1O95297 269 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 CDK1P06493 297 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 LIMS3P0CW19 117 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 LIMS4P0CW20 117 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 SPNP16150 400 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 NPY1RP25929 384 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ADORA1P30542 326 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 LGALS7P47929 136 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 CCL23P55773 120 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 MAP3K7CLP57077 242 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 TAS2R43P59537 309 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 DSTNP60981 165 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 MEF2CQ06413 473 aaPredicted RBP1.61□□□□□ -2.15
PTPN4-205ENST00000433888 CDC20Q12834 499 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 TEX30Q5JUR7 227 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 IDNKQ5T6J7 187 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 CASP12Q6UXS9 341 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 GALNT10Q86SR1 603 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 MARCH3Q86UD3 253 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 CYP4Z2PQ8N1L4 340 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 STK40Q8N2I9 435 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 SPICQ8N5J4 248 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF738Q8NE65 137 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR2Z1Q8NG97 314 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR6K3Q8NGY3 331 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR1L1Q8NH94 360 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 LINC01560Q8TB33 94 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ENKURQ8TC29 256 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 NELFBQ8WX92 580 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 YIPF6Q96EC8 236 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 WDR34Q96EX3 536 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 NARS2Q96I59 477 aaKnown RBP1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR2M4Q96R27 311 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 OR2A7Q96R45 310 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ANAPC13Q9BS18 74 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 DCUN1D5Q9BTE7 237 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 RSG1Q9BU20 258 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 DRC3Q9H069 523 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 TOLLIPQ9H0E2 274 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 MFSD1Q9H3U5 465 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 DSN1Q9H410 356 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 ASCL3Q9NQ33 180 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 SDHAF3Q9NRP4 125 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 DDX19AQ9NUU7 478 aaKnown RBP1.61□□□□□ -2.15
PTPN4-205ENST00000433888 PRO0628Q9UI54 55 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 SLC7A11Q9UPY5 501 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 INSIG2Q9Y5U4 225 aa1.61□□□□□ -2.15
PTPN4-205ENST00000433888 YEATS2Q9ULM3 1422 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 IGHV7-4-1A0A0J9YVY3 117 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 EFCAB9A8MZ26 197 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 F5H5T6 163 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 BPY2O14599 106 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 FABP7O15540 132 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 GATCO43716 136 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ENTPD6O75354 484 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 CNMDO75829 334 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 VAMP5O95183 116 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 HLA-DQA1P01909 254 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF3P17036 446 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 HLA-DMAP28067 261 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 PRSS3P35030 304 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 COILP38432 576 aaPredicted RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 OPRK1P41145 380 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 HBG1P69891 147 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 HBG2P69892 147 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 DEFA6Q01524 100 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 BNIP2Q12982 314 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 YIF1BQ5BJH7 314 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 CDKL4Q5MAI5 379 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TIMM23BQ5SRD1 257 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 NXNL2Q5VZ03 156 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms