RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PIEZO2Q9H5I5 2752 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 DMXL2Q8TDJ6 3036 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 SIP14410 1827 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 DOCK2Q92608 1830 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 RALGAPA2Q2PPJ7 1873 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 NBEAQ8NFP9 2946 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 ASXL3Q9C0F0 2248 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 LAMA5O15230 3695 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 C5orf63A6NC05 138 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 NDUFS8O00217 210 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 BET1O15155 118 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 CDC40O60508 579 aaKnown RBP eCLIP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 CCNKO75909 580 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 CCNE2O96020 404 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 GCGP01275 180 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGLV3-25P01717 112 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 PTNP21246 168 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 GGT2P36268 569 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 TAS2R31P59538 309 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 TAS2R46P59540 309 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 PAFAH1B2P68402 229 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC35B1P78383 322 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 PPIDQ08752 370 aaKnown RBP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 MOBPQ13875 183 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 C16orf72Q14CZ0 275 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 PTGES3Q15185 160 aaKnown RBP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 CPTPQ5TA50 214 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 FAM71E1Q6IPT2 247 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 TMPRSS11AQ6ZMR5 421 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 ARHGAP18Q8N392 663 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 PDCL2Q8N4E4 241 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 ASCC1Q8N9N2 400 aaKnown RBP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 NECAP1Q8NC96 275 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR10Z1Q8NGY1 313 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 RXFP4Q8TDU9 374 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 FRZBQ92765 325 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF382Q96SR6 550 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 EMC6Q9BV81 110 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 API5Q9BZZ5 524 aaKnown RBP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 STMN3Q9NZ72 180 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 ADA2Q9NZK5 511 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 BZW2Q9Y6E2 419 aaKnown RBP1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 MYH3P11055 1940 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 LOXHD1Q8IVV2 1947 aa1.83□□□□□ -2.12
HMGB1P27-201ENST00000431429 MYO9AB2RTY4 2548 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 GBF1Q92538 1859 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MYO7AQ13402 2215 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ABCA12Q86UK0 2595 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGHV2OR16-5A0A0B4J2B6 119 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MYBPHLA2RUH7 354 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 DFFAO00273 331 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 POLR1CO15160 346 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ALOX12BO75342 701 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MED6O75586 246 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SERPINB7O75635 380 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 UPK1BO75841 260 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 TTC4O95801 387 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 S100A9P06702 114 aaKnown RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ADRA2AP08913 450 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MRPL3P09001 348 aaKnown RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 C1GALT1C1LP0DN25 315 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF32P17041 273 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 P2RY2P41231 377 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MLF1P58340 268 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 LINC00315P59091 139 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SNAP25P60880 206 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 CDC20Q12834 499 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 STK38Q15208 465 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 VAMP3Q15836 100 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ATP6V1FQ16864 119 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ABCA11PQ4W5N1 156 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 HSP90AA4PQ58FG1 418 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 NANOGP8Q6NSW7 305 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 EPGNQ6UW88 154 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 TIFABQ6ZNK6 161 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SNX20Q7Z614 316 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SYS1Q8N2H4 156 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 DRAM1Q8N682 238 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPANXA2-OT1Q8N9U9 137 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 UBAC2Q8NBM4 344 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 TSTD1Q8NFU3 115 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR6K6Q8NGW6 343 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR1L1Q8NH94 360 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 LINC01560Q8TB33 94 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 FAM131CQ96AQ9 280 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 RBMXL1Q96E39 390 aaKnown RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR4K3Q96R72 315 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPIN2AQ99865 258 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 GABRG3Q99928 467 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPIN2BQ9BPZ2 258 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SULT4A1Q9BR01 284 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 ARV1Q9H2C2 271 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 C1orf198Q9H425 327 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 XKR8Q9H6D3 395 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 EXOSC4Q9NPD3 245 aaKnown RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 SIRT7Q9NRC8 400 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 TFR2Q9UP52 801 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 COL4A4P53420 1690 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 CREBBPQ92793 2442 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 TET1Q8NFU7 2136 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms