RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RALGAPA1Q6GYQ0 2036 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 A0A096LPE4 126 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 A0A1W2PPZ6 126 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FABP5P3A8MUU1 101 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 CXorf49A8MYA2 514 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 C9JAW5 83 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RAMP1O60894 148 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SMIM17P0DL12 118 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 GABRA3P34903 492 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RPL13AP40429 203 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 GABARAPL2P60520 117 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RUNX1Q01196 453 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 AADACL3Q5VUY0 350 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 OR2T5Q6IEZ7 315 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF880Q6PDB4 577 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF730Q6ZMV8 503 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SLC30A7Q8NEW0 376 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 OR2T29Q8NH02 315 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HIST1H2AAQ96QV6 131 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ACTR3CQ9C0K3 210 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 PELI2Q9HAT8 420 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM100Q9NV29 134 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 IL36GQ9NZH8 169 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TFCP2L1Q9NZI6 479 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HIGD1AQ9Y241 93 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 DNMT1P26358 1616 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 CASTOR2A6NHX0 329 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 BTNL10A8MVZ5 291 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 F2RL2O00254 374 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 NEURL1O76050 574 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 DXOO77932 396 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 MT-ND6P03923 174 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HIST1H1DP16402 221 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ALOX5APP20292 161 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HTR1DP28221 377 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FAUP35544 74 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 P2RY1P47900 373 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 DLK1P80370 383 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 P2RY6Q15077 328 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF79Q15937 498 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SPATA45Q537H7 98 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 PHLDA2Q53GA4 152 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TIMM23BQ5SRD1 257 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 LRRC55Q6ZSA7 311 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RNF149Q8NC42 400 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 OR2AJ1Q8NGZ0 328 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HSD17B10Q99714 261 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SLC25A51Q9H1U9 297 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF442Q9H7R0 627 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RNF122Q9H9V4 155 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 NMRAL1Q9HBL8 299 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TVP23BQ9NYZ1 205 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 MMP17Q9ULZ9 603 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RNF17Q9BXT8 1623 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ROBO2Q9HCK4 1378 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 MEIS3P1A6NDR6 274 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FAM90A8PA6NJQ4 464 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 MCRIP1C9JLW8 97 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TBL1XO60907 577 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 CRYGBP07316 175 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FAM90A13PP0C7W8 464 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FAM90A24PP0C7X0 464 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SELENOPP49908 381 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 CDK3Q00526 305 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 HSPB3Q12988 150 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 PRDX4Q13162 271 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 RPL7L1Q6DKI1 246 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FCRL6Q6DN72 434 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 C6orf120Q7Z4R8 191 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ADGRE4PQ86SQ3 457 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 OR13H1Q8NG92 308 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 NEIL3Q8TAT5 605 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 PLPPR1Q8TBJ4 325 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 SLC25A43Q8WUT9 341 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 FAM103A1Q9BTL3 118 aaKnown RBP4.7□□□□□ -1.66
PTPN4-203ENST00000430976 LRRC3Q9BY71 257 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 ABCC1P33527 1531 aa4.7□□□□□ -1.66
PTPN4-203ENST00000430976 TCP10L2B9ZVM9 353 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF682O95780 498 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 DBIP07108 87 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 FGF3P11487 239 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 CXCL2P19875 107 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 PTGER1P34995 402 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 OR1E2P47887 323 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MRPS6P82932 125 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 CLEC12BQ2HXU8 276 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF542PQ5EBM4 170 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM69Q5SWH9 247 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF695Q8IW36 515 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 OSR2Q8N2R0 312 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 RNF175Q8N4F7 328 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MDGA1Q8NFP4 955 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 VN1R2Q8NFZ6 395 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 OR4F6Q8NGB9 312 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 OR52L1Q8NGH7 329 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 SECTM1Q8WVN6 248 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM106AQ96A25 262 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms