RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PRDX2P32119 198 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 AQP4P55087 323 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 ST3GAL4Q11206 333 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 IL24Q13007 206 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 XAF1Q6GPH4 301 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 EGFL6Q8IUX8 553 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 ZFP41Q8N8Y5 198 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 OR5D18Q8NGL1 313 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 NRG4Q8WWG1 115 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 EMG1Q92979 244 aaKnown RBP10.59□□□□□ -0.71
VRK3-203ENST00000424804 C10orf35Q96D05 121 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 CEP19Q96LK0 163 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 OPALINQ96PE5 141 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 PKIBQ9C010 78 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 DIMT1Q9UNQ2 313 aaKnown RBP10.59□□□□□ -0.71
VRK3-203ENST00000424804 HSPE1-MOB4S4R3N1 261 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 IGKV1-9A0A0C4DH69 117 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 A0A1W2PRD5 423 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 A0A1W2PRF3 423 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 A0A1W2PRM7 423 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 EFCAB10A6NFE3 127 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 TIMM23O14925 209 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 MYL12BO14950 172 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 NPFFO15130 113 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 GPR37O15354 613 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 RPSAP08865 295 aaKnown RBP10.58□□□□□ -0.72
VRK3-203ENST00000424804 CRIP3Q6Q6R5 217 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 C1orf122Q6ZSJ8 110 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 UTS2BQ765I0 119 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 CMTM4Q8IZR5 234 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 CD177Q8N6Q3 437 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
VRK3-203ENST00000424804 NRIP2Q9BQI9 281 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 ZCCHC4Q9H5U6 513 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 MTCH1Q9NZJ7 389 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 ZNF222Q9UK12 451 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
VRK3-203ENST00000424804 F8VVB4 439 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 F8VWA3 439 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 M0QZ24 198 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 ANGPTL7O43827 346 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 PIPP12273 146 aaPredicted RBP10.57□□□□□ -0.72
VRK3-203ENST00000424804 PRKACAP17612 351 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 BCL3P20749 454 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 MPZP25189 248 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 DUSP1P28562 367 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 CDK5R1Q15078 307 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 RPL22L1Q6P5R6 122 aaKnown RBP10.57□□□□□ -0.72
VRK3-203ENST00000424804 GDPGP1Q6ZNW5 385 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 SATL1Q86VE3 508 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 SERPINA12Q8IW75 414 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 MKXQ8IYA7 352 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 DNAAF1Q8NEP3 725 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 OR5D14Q8NGL3 314 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 HAVCR2Q8TDQ0 301 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 TFAP2CQ92754 450 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 SPSB1Q96BD6 273 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 GPER1Q99527 375 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 JAM3Q9BX67 310 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 VCX3BQ9H321 246 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
VRK3-203ENST00000424804 MEX3AA1L020 520 aaKnown RBP10.56□□□□□ -0.72
VRK3-203ENST00000424804 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 MAGEB3O15480 346 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 SULT1B1O43704 296 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 NOS1APO75052 506 aaPredicted RBP10.56□□□□□ -0.72
VRK3-203ENST00000424804 LALBAP00709 142 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 CD2P06729 351 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 FBP1P09467 338 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 SAA4P35542 130 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 NPBWR2P48146 333 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 UBE2E1P51965 193 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 CAV3P56539 151 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 COL10A1Q03692 680 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 HIST2H2BDQ6DRA6 164 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 SLC35E4Q6ICL7 350 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 LAIR2Q6ISS4 152 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 RNF144BQ7Z419 303 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 OR13C5Q8NGS8 318 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 GPR148Q8TDV2 347 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 NKX3-1Q99801 234 aaPredicted RBP10.56□□□□□ -0.72
VRK3-203ENST00000424804 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
VRK3-203ENST00000424804 TAS2R4Q9NYW5 299 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 IL36RNQ9UBH0 155 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 PSORS1C1Q9UIG5 152 aa10.56□□□□□ -0.72
VRK3-203ENST00000424804 SIRT4Q9Y6E7 314 aaPredicted RBP10.56□□□□□ -0.72
VRK3-203ENST00000424804 TET2Q6N021 2002 aaPredicted RBP10.55□□□□□ -0.72
VRK3-203ENST00000424804 A0A0G2JK05 382 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 M0R1W7 72 aa10.55□□□□□ -0.72
VRK3-203ENST00000424804 TMEM225BP0DP42 221 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms