RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 FAM3AP98173 230 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OR51H1Q8NH63 302 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 ERGIC1Q969X5 290 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 FIGNL2A6NMB9 653 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF716A6NP11 495 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 TNFSF15O95150 251 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 IL2RAP01589 272 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 GP1BAP07359 652 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 PRF1P14222 555 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
MCF2L-213ENST00000421756 MALLQ13021 153 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 RAB35Q15286 201 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 H3F3CQ6NXT2 135 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 TLNRD1Q9H1K6 362 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 SLC2A8Q9NY64 477 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 EXPH5Q8NEV8 1989 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 A0A087WZY1 265 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 A0A1B0GW55 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 A8MXK9 166 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF732B4DXR9 585 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 SCGNO76038 276 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L2P0CJ85 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L3P0CJ86 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L4P0CJ87 422 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L5P0CJ88 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L6P0CJ89 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4L7P0CJ90 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DAOP14920 347 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 NHLH2Q02577 135 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 RNASE11Q8TAA1 199 aaKnown RBP11.55□□□□□ -0.56
MCF2L-213ENST00000421756 DUX4Q9UBX2 424 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 PRSS50Q9UI38 385 aa11.55□□□□□ -0.56
MCF2L-213ENST00000421756 A0A1W2PNU3 283 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 SYNGR1O43759 233 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 SCTP09683 121 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM33P57088 247 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF239Q16600 458 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 SWI5Q1ZZU3 235 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 LPCAT3Q6P1A2 487 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 PSMF1Q92530 271 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 Q96M66 194 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 OCSTAMPQ9BR26 566 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 SLC25A32Q9H2D1 315 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 LUZP4Q9P127 313 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 OSGIN2Q9Y236 505 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 KCNIP3Q9Y2W7 256 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ABCA1O95477 2261 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ABCA4P78363 2273 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 CDK2AP1O14519 115 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 CNOT4O95628 575 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 FCGR3AP08637 254 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 AADACP22760 399 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 GNRHRP30968 328 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 CNN3Q15417 329 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 FBXW12Q6X9E4 464 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 UBE2J1Q9Y385 318 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 LIPGQ9Y5X9 500 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ETV2O00321 342 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF44P15621 663 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 PRKACAP17612 351 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 C10orf128Q5T292 105 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 NUFIP2Q7Z417 695 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 NKX6-2Q9C056 277 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 STRADBQ9C0K7 418 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 SHARPINQ9H0F6 387 aa11.54□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF552Q9H707 407 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-213ENST00000421756 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 SERPINE3A8MV23 424 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 CST7O76096 145 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 SYNGR4O95473 234 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 NAT2P11245 290 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 CA6P23280 308 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 PDZK1IP1Q13113 114 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 VAX1Q5SQQ9 334 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM268Q5VZI3 342 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 SCGB3A2Q96PL1 93 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 OR14J1Q9UGF5 321 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 FBXO9Q9UK97 447 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-213ENST00000421756 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 LPAR6P43657 344 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 CYCSP99999 105 aaKnown RBP11.53□□□□□ -0.56
MCF2L-213ENST00000421756 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 V9GYS6 101 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 CFPP27918 469 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 PRDX4Q13162 271 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 OR2B11Q5JQS5 317 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 Q6ZRG5 221 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 CNEP1R1Q8N9A8 125 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms