RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MINOS1-NBL1R4GNA1 71 aa14□□□□□ -0.17
MSH6-203ENST00000420813 TRBV2A0A0J9YWF9 115 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 CYB5AP00167 134 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 KIR3DL2P43630 455 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ATP1B3P54709 279 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ACTA2P62736 377 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ACTG2P63267 376 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ACTC1P68032 377 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ACTA1P68133 377 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ZNF85Q03923 595 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 EMX1Q04741 257 aaPredicted RBP13.99□□□□□ -0.17
MSH6-203ENST00000420813 DYNC1I2Q13409 638 aaKnown RBP13.99□□□□□ -0.17
MSH6-203ENST00000420813 EDDM3AQ14507 147 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 HABP2Q14520 560 aaPredicted RBP13.99□□□□□ -0.17
MSH6-203ENST00000420813 ZNF146Q15072 292 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 GRK1Q15835 563 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 TMEM244Q5VVB8 128 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 ZBTB49Q6ZSB9 765 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 TMEM219Q86XT9 240 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 WIPF2Q8TF74 440 aaPredicted RBP13.99□□□□□ -0.17
MSH6-203ENST00000420813 CENPNQ96H22 339 aaPredicted RBP13.99□□□□□ -0.17
MSH6-203ENST00000420813 RIBC2Q9H4K1 309 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 GNG8Q9UK08 70 aa13.99□□□□□ -0.17
MSH6-203ENST00000420813 MEX3AA1L020 520 aaKnown RBP13.98□□□□□ -0.17
MSH6-203ENST00000420813 MGST3O14880 152 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 IGHA1P01876 353 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 PRKACBP22694 351 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 ERP29P30040 261 aaKnown RBP13.98□□□□□ -0.17
MSH6-203ENST00000420813 CDC42P60953 191 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 TP53I3Q53FA7 332 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 SPIN3Q5JUX0 258 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 HIST2H2BDQ6DRA6 164 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 UTS2BQ765I0 119 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 NDUFA11Q86Y39 141 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 FAM58AQ8N1B3 248 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 ZNF676Q8N7Q3 588 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 OR52N4Q8NGI2 321 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 TRUB1Q8WWH5 349 aaKnown RBP13.98□□□□□ -0.17
MSH6-203ENST00000420813 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
MSH6-203ENST00000420813 WNT10AQ9GZT5 417 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 RBFOX1Q9NWB1 397 aaKnown RBP13.98□□□□□ -0.17
MSH6-203ENST00000420813 GLS2Q9UI32 602 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 OAZ3Q9UMX2 235 aa13.98□□□□□ -0.17
MSH6-203ENST00000420813 IGHV2-26A0A0B4J1V2 119 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 IGKV1-9A0A0C4DH69 117 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 F2RL2O00254 374 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 XPNPEP2O43895 674 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 PSPNO60542 156 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 ATP5HO75947 161 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 INMTO95050 263 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 ISG15P05161 165 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 ATF1P18846 271 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 BCL3P20749 454 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 GABRR1P24046 479 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 AZGP1P25311 298 aaKnown RBP13.97□□□□□ -0.17
MSH6-203ENST00000420813 NPBWR2P48146 333 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 FDX2Q6P4F2 183 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 LHFPL2Q6ZUX7 228 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 RDH10Q8IZV5 341 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 OR4S1Q8NGB4 309 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 OR2G2Q8NGZ5 317 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 SPSB1Q96BD6 273 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 ADAT3Q96EY9 351 aaPredicted RBP13.97□□□□□ -0.17
MSH6-203ENST00000420813 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 CHST6Q9GZX3 395 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 TMEM133Q9H2Q1 129 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 IL36RNQ9UBH0 155 aa13.97□□□□□ -0.17
MSH6-203ENST00000420813 UBE2J1Q9Y385 318 aaPredicted RBP13.97□□□□□ -0.17
MSH6-203ENST00000420813 FAM90A22PA8MWA6 464 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 H3BUI4 141 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 ENTPD6O75354 484 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 ALDOBP05062 364 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 CD28P10747 220 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 PRKACAP17612 351 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 POU3F4P49335 361 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 MTCP1P56278 107 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 P2RX3P56373 397 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 IL18R1Q13478 541 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 REC114Q7Z4M0 266 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 TPRX1Q8N7U7 411 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 OR4F17Q8NGA8 305 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 NDNFQ8TB73 568 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 OR4F4Q96R69 305 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 MBOAT4Q96T53 435 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 HILPDAQ9Y5L2 63 aa13.96□□□□□ -0.17
MSH6-203ENST00000420813 PEX14O75381 377 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 ZNF20P17024 532 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 HTR1DP28221 377 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 DUSP1P28562 367 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 OR3A1P47881 315 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 CCR9P51686 369 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 PDZK1IP1Q13113 114 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 FBLN7Q53RD9 439 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 SLC25A30Q5SVS4 291 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 OR52W1Q6IF63 320 aa13.95□□□□□ -0.18
MSH6-203ENST00000420813 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms