RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ELL3Q9HB65 397 aaPredicted RBP12.04□□□□□ -0.48
SHMT1P1-201ENST00000419974 GCM1Q9NP62 436 aa12.04□□□□□ -0.48
SHMT1P1-201ENST00000419974 NPTNQ9Y639 398 aa12.04□□□□□ -0.48
SHMT1P1-201ENST00000419974 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
SHMT1P1-201ENST00000419974 TRAV18A0A075B6X5 111 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 SOCS1O15524 211 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 PDCD6O75340 191 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 KNG1P01042 644 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 IL7P13232 177 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 LMO1P25800 156 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 CHATP28329 748 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 PRSS3P35030 304 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 PAX5Q02548 391 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 TLE4Q04727 773 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 SHEQ5VZ18 495 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 SIGIRRQ6IA17 410 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 Q6ZTK2 550 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 CHST4Q8NCG5 386 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 OR10K1Q8NGX5 313 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 HPS1Q92902 700 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 YIPF5Q969M3 257 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 C14orf79Q96F83 325 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 NICN1Q9BSH3 213 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 THAP7Q9BT49 309 aaPredicted RBP12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 TAS2R8Q9NYW2 309 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 TREM2Q9NZC2 230 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 ANAPC10Q9UM13 185 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
SHMT1P1-201ENST00000419974 DCHS2Q6V1P9 2916 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 F8VVB4 439 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 F8VWA3 439 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 H7C417 338 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 PLATP00750 562 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 CD8AP01732 235 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 LPLP06858 475 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 FUT3P21217 361 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 BLVRBP30043 206 aaPredicted RBP12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 IFITM3Q01628 133 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 SCN1BQ07699 218 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 CDNFQ49AH0 187 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 C16orf87Q6PH81 154 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 LYSMD2Q8IV50 215 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 ITLN1Q8WWA0 313 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 FCAMRQ8WWV6 532 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 SEH1LQ96EE3 360 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 MTFP1Q9UDX5 166 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 MRPS7Q9Y2R9 242 aaKnown RBP12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 FBN2P35556 2912 aa12.02□□□□□ -0.49
SHMT1P1-201ENST00000419974 A0A1W2PPR1 153 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 ECDO95905 644 aaPredicted RBP12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 SSTR2P30874 369 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 CBX5P45973 191 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 DYRK1AQ13627 763 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 TAF9Q16594 264 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 PIGYQ3MUY2 71 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 PRAMEF6Q5VXH4 476 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 STEAP3Q658P3 488 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 C20orf204Q6ZNR8 217 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 GCSAMQ8N6F7 178 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 IGFBPL1Q8WX77 278 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 EMG1Q92979 244 aaKnown RBP12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 ARHGAP5-AS1Q96IT6 56 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 OCSTAMPQ9BR26 566 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 PECRQ9BY49 303 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 SAP30LQ9HAJ7 183 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 DYNLRB1Q9NP97 96 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 GLS2Q9UI32 602 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 CSMD2Q7Z408 3487 aa12.01□□□□□ -0.49
SHMT1P1-201ENST00000419974 A6NLC8 198 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 LRRC30A6NM36 301 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12□□□□□ -0.49
SHMT1P1-201ENST00000419974 NXPH2O95156 264 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 GSTT2BP0CG30 244 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 MUC1P15941 1255 aaPredicted RBP12□□□□□ -0.49
SHMT1P1-201ENST00000419974 PRKACAP17612 351 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 NAT1P18440 290 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 KCNJ3P48549 501 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 ACTBP60709 375 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 ACTG1P63261 375 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 ASAH1Q13510 395 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 TEX36Q5VZQ5 186 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 Q6P435 159 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 SNX29P2Q8IUI4 249 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 IZUMO1Q8IYV9 350 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 C1orf87Q8N0U7 546 aa12□□□□□ -0.49
SHMT1P1-201ENST00000419974 GAPTQ8N292 157 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms