RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
NUP50-204ENST00000417702 FGF20Q9NP95 211 aaPredicted RBP12.53□□□□□ -0.4
NUP50-204ENST00000417702 NBEAL1Q6ZS30 2694 aa12.53□□□□□ -0.4
NUP50-204ENST00000417702 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 E9PI62 339 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 SPRY1O43609 319 aaPredicted RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 GPR137BO60478 399 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 ZFPL1O95159 310 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 HAND1O96004 215 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 MT-ND2P03891 347 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 PIPP12273 146 aaPredicted RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 BCL3P20749 454 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 DCKP27707 260 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 HSPA13P48723 471 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 EDDM3BP56851 147 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 PDZK1IP1Q13113 114 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 MIDNQ504T8 468 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 SERPINA12Q8IW75 414 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 OR5D14Q8NGL3 314 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 RFT1Q96AA3 541 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 PDCD1LG2Q9BQ51 273 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 JAM3Q9BX67 310 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 SEBOXQ9HB31 216 aaPredicted RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 C1RLQ9NZP8 487 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 ZNRD1Q9P1U0 126 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 DHDHQ9UQ10 334 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
NUP50-204ENST00000417702 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.41
NUP50-204ENST00000417702 ANK2Q01484 3957 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 ZNF737O75373 536 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 NDUFA7O95182 113 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 CCL3L1P16619 93 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 PRKACAP17612 351 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 MYL12AP19105 171 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 GABRR1P24046 479 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 NPBWR2P48146 333 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 ZNF273Q14593 569 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 HCP5Q6MZN7 132 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 OR5R1Q8NH85 324 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 PCDHGB5Q9Y5G0 923 aa12.51□□□□□ -0.41
NUP50-204ENST00000417702 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 ALX3O95076 343 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 HCKP08631 526 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 COX7A1P24310 79 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 DUSP1P28562 367 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 VHLP40337 213 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 SNU13P55769 128 aaKnown RBP12.5□□□□□ -0.41
NUP50-204ENST00000417702 LGALS4P56470 323 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
NUP50-204ENST00000417702 MED21Q13503 144 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 EDDM3AQ14507 147 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 ZNF146Q15072 292 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 GRK1Q15835 563 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 RPL22L1Q6P5R6 122 aaKnown RBP12.5□□□□□ -0.41
NUP50-204ENST00000417702 IZUMO2Q6UXV1 221 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 C11orf42Q8N5U0 333 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 PARP16Q8N5Y8 322 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 OR5D18Q8NGL1 313 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 SPACA5Q96QH8 159 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 SLITRK2Q9H156 845 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
NUP50-204ENST00000417702 IL36RNQ9UBH0 155 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
NUP50-204ENST00000417702 EXOSC1Q9Y3B2 195 aaKnown RBP12.5□□□□□ -0.41
NUP50-204ENST00000417702 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 SH2D1BO14796 132 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 MAGEB3O15480 346 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 SULT1B1O43704 296 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 KDM4BO94953 1096 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 ZNF728P0DKX0 622 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 CALCBP10092 127 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 ETV1P50549 477 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
NUP50-204ENST00000417702 RELBQ01201 579 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 TAF9Q16594 264 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 CCDC58Q4VC31 144 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
NUP50-204ENST00000417702 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
NUP50-204ENST00000417702 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 BEND2Q8NDZ0 799 aa12.49□□□□□ -0.41
NUP50-204ENST00000417702 GGHQ92820 318 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms