RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 UCHL1P09936 223 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 NPIPA8P0DM63 369 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CD79AP11912 226 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ETS1P14921 441 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 MAKP20794 623 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 SERPINA2P20848 420 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 GPX3P22352 226 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CPT2P23786 658 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 PRPH2P23942 346 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZBTB25P24278 435 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 HRH2P25021 359 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RFX3P48380 749 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CAMLGP49069 296 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CDKN2DP55273 166 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 SSBP2P81877 361 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 IL10RBQ08334 325 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF616Q08AN1 781 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 MADCAM1Q13477 382 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RCAN2Q14206 197 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 PTGES3Q15185 160 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 SLC9A3R2Q15599 337 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 MAPK14Q16539 360 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 NTRK2Q16620 822 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 KHDC3LQ587J8 217 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TCTEX1D4Q5JR98 221 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 GCNT6Q5T4J0 391 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ADAM5Q6NVV9 412 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 FAHD1Q6P587 224 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CNIH2Q6PI25 160 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 HEPN1Q6WQI6 88 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF836Q6ZNA1 936 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 DET1Q7L5Y6 550 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 BCDIN3DQ7Z5W3 292 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ANKRD37Q7Z713 158 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM58AQ8N1B3 248 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF664Q8N3J9 261 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 BPIFB2Q8N4F0 458 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 KCNRGQ8N5I3 272 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TMEM156Q8N614 296 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 PROKR2Q8NFJ6 384 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4F15Q8NGB8 312 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 OR4K2Q8NGD2 314 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 FLVCR1-AS1Q8TAF5 88 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 LMO3Q8TAP4 145 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 GGHQ92820 318 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 FAM162AQ96A26 154 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ANKRD9Q96BM1 317 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RASD2Q96D21 266 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RNFT2Q96EX2 444 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TEX37Q96LM6 180 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZFP3Q96NJ6 502 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TECTBQ96PL2 329 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 OR5B2Q96R09 309 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 OR8B4Q96RC9 309 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 F2RL3Q96RI0 385 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CLCC1Q96S66 551 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 LYSMD1Q96S90 227 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RSPO3Q9BXY4 272 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF350Q9GZX5 532 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ARL6Q9H0F7 186 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TLNRD1Q9H1K6 362 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 SMDT1Q9H4I9 107 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 RGCCQ9H4X1 137 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 WDR55Q9H6Y2 383 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 PLAC1Q9HBJ0 212 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 HHATLQ9HCP6 504 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 B3GAT2Q9NPZ5 323 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 SDR39U1Q9NRG7 319 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 CENPMQ9NSP4 180 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 ASIC5Q9NY37 505 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 DOK5Q9P104 306 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 LEF1Q9UJU2 399 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 A4GNTQ9UNA3 340 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 LSM2Q9Y333 95 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TENM2Q9NT68 2774 aa4.7□□□□□ -1.66
ECHDC1-206ENST00000417628 TRAV8-7A0A075B6U6 113 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 A0A087WWC5 75 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 SH2D7A6NKC9 451 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 OR2AG2A6NM03 316 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 F6UZH7 168 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF264O43296 627 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 SSNA1O43805 119 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 MMP23AO75900 390 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 VAMP5O95183 116 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 PPP1R3DO95685 299 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 CST1P01037 141 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 PMP2P02689 132 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 CLEC3BP05452 202 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 ADRA2AP08913 450 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 CDKN2BP42772 138 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 CRYBB2P43320 205 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 CAV2P51636 162 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 ZNF41P51814 821 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 MVDP53602 400 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 RHOGP84095 191 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 FOXF2Q12947 444 aa4.69□□□□□ -1.66
ECHDC1-206ENST00000417628 SNTB2Q13425 540 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms