RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 IL13RA1P78552 427 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 MRPS15P82914 257 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 C2orf76Q3KRA6 126 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 PIGYQ3MUY2 71 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 LRRC10Q5BKY1 277 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NKAPLQ5M9Q1 402 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TEX36Q5VZQ5 186 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 C1QL2Q7Z5L3 287 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 LGALS14Q8TCE9 139 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ACOT12Q8WYK0 555 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ST8SIA4Q92187 359 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 H1FXQ92522 213 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DGCR14Q96DF8 476 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NEIL1Q96FI4 390 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NEDD4LQ96PU5 975 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 CCL13Q99616 98 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM246Q9BRR3 403 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ATG5Q9H1Y0 275 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 KCNK15Q9H427 330 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ABRACLQ9P1F3 81 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 COMMD3Q9UBI1 195 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ADAM30Q9UKF2 790 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RAB22AQ9UL26 194 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ETV7Q9Y603 341 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 BAHCC1Q9P281 2608 aa7.09□□□□□ -1.27
TRIM48-201ENST00000417545 CELSR2Q9HCU4 2923 aa7.09□□□□□ -1.27
TRIM48-201ENST00000417545 A0A0B4J203 849 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 A0A0G2JK05 382 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM272A0A1B0GTI8 110 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 A0A1W2PP11 408 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CEACAM18A8MTB9 384 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 RNF223E7ERA6 249 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 F8VVB4 439 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 F8VWA3 439 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 HSPB6O14558 160 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 SCGNO76038 276 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 VSIG8P0DPA2 414 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 PSG2P11465 335 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 PITPNBP48739 271 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CEBPDP49716 269 aaPredicted RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 SCAND1P57086 179 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 ERVK11-1P61568 191 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 HOXA4Q00056 320 aaPredicted RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 RBM39Q14498 530 aaKnown RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 TAF9Q16594 264 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 MPV17LQ2QL34 196 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 TUSC1Q2TAM9 212 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 PAN3Q58A45 887 aaKnown RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 STUMQ69YW2 141 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 ELP2Q6IA86 826 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 OR10K2Q6IF99 312 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 ASCL4Q6XD76 172 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 GDPD3Q7L5L3 318 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 LRRC28Q86X40 367 aaPredicted RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 ZNF561Q8N587 486 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 SAMD12Q8N8I0 201 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CHST4Q8NCG5 386 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 OR56B1Q8NGI3 324 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CLDND2Q8NHS1 167 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 SEH1LQ96EE3 360 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 REG4Q9BYZ8 158 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 DNTTIP1Q9H147 329 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 SPACA1Q9HBV2 294 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM165Q9HC07 324 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 HES4Q9HCC6 221 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CCDC59Q9P031 241 aaKnown RBP7.09□□□□□ -1.28
TRIM48-201ENST00000417545 IL36RNQ9UBH0 155 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 CLN8Q9UBY8 286 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 AKAP6Q13023 2319 aa7.09□□□□□ -1.28
TRIM48-201ENST00000417545 HECTD1Q9ULT8 2610 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 A0A075B6Q4 140 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FUOMA2VDF0 154 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A10PA6NDY2 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A18PA6NE21 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A16PA6NEW6 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A20PA6NIJ5 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A8PA6NJQ4 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A7PA6NKC0 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A22PA8MWA6 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM14DPA8MWL7 114 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A12PA8MX19 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A5PA8MXJ8 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A23PA8MXZ1 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 MCRIP1C9JLW8 97 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
TRIM48-201ENST00000417545 OR2H2O95918 312 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 PAHP00439 452 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 TFF1P04155 84 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A15PP0C7V4 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A13PP0C7W8 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A14PP0C7W9 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 FAM90A24PP0C7X0 464 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 RAB6AP20340 208 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 S100A5P33763 92 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 TALDO1P37837 337 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 VEGFCP49767 419 aa7.08□□□□□ -1.28
TRIM48-201ENST00000417545 NPY4RP50391 375 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms