RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 NUPL2O15504 423 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 EIF4E2O60573 245 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 ZNF253O75346 499 aa2□□□□□ -2.09
MCF2-204ENST00000414978 SRP72O76094 671 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 RFC3P40938 356 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TTPAP49638 278 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ZNF140P52738 457 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 STC1P52823 247 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C2orf80Q0P641 193 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ASAH1Q13510 395 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MAD2L1BPQ15013 274 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 MAPRE2Q15555 327 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C5orf47Q569G3 176 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FAM45BPQ6NSW5 357 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CGB2Q6NT52 195 aa2□□□□□ -2.09
MCF2-204ENST00000414978 C22orf39Q6P5X5 142 aa2□□□□□ -2.09
MCF2-204ENST00000414978 Q6ZVH6 145 aa2□□□□□ -2.09
MCF2-204ENST00000414978 GKN2Q86XP6 184 aa2□□□□□ -2.09
MCF2-204ENST00000414978 KRTAP1-3Q8IUG1 177 aa2□□□□□ -2.09
MCF2-204ENST00000414978 SYNPRQ8TBG9 265 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FAM45AQ8TCE6 357 aa2□□□□□ -2.09
MCF2-204ENST00000414978 VN1R17PQ8TDU5 208 aa2□□□□□ -2.09
MCF2-204ENST00000414978 KCTD4Q8WVF5 259 aa2□□□□□ -2.09
MCF2-204ENST00000414978 YIPF6Q96EC8 236 aa2□□□□□ -2.09
MCF2-204ENST00000414978 TIMM29Q9BSF4 260 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HDHD2Q9H0R4 259 aa2□□□□□ -2.09
MCF2-204ENST00000414978 PPDPFQ9H3Y8 114 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FAM96AQ9H5X1 160 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ZNF385DQ9H6B1 395 aa2□□□□□ -2.09
MCF2-204ENST00000414978 JPT2Q9H910 190 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ISG20L2Q9H9L3 353 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 MRPL40Q9NQ50 206 aaKnown RBP2□□□□□ -2.09
MCF2-204ENST00000414978 FKBP14Q9NWM8 211 aa2□□□□□ -2.09
MCF2-204ENST00000414978 OR1A1Q9P1Q5 309 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ABCD2Q9UBJ2 740 aa2□□□□□ -2.09
MCF2-204ENST00000414978 MARCOQ9UEW3 520 aaPredicted RBP2□□□□□ -2.09
MCF2-204ENST00000414978 Q9UF83 564 aa2□□□□□ -2.09
MCF2-204ENST00000414978 CLEC4EQ9ULY5 219 aa2□□□□□ -2.09
MCF2-204ENST00000414978 HS3ST2Q9Y278 367 aa2□□□□□ -2.09
MCF2-204ENST00000414978 ZNF835Q9Y2P0 537 aa2□□□□□ -2.09
MCF2-204ENST00000414978 URGCP-MRPS24S4R325 110 aa2□□□□□ -2.09
MCF2-204ENST00000414978 FAM172BPA6NC97 362 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 C2orf74A8MZ97 194 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TMEM114B3SHH9 223 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 E5RI56 91 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 K7EM74 188 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 K7N7A8 449 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TOR1AO14656 332 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 DHRS3O75911 302 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RPN2P04844 631 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RBP1P09455 135 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 HLA-GP17693 338 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 AQP1P29972 269 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TIMP3P35625 211 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CA7P43166 264 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CRYBA2P53672 197 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CXCR4P61073 352 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ELOCQ15369 112 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 STUMQ69YW2 141 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 WDR74Q6RFH5 385 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 FAM220AQ7Z4H9 259 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SLC25A42Q86VD7 318 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 STK40Q8N2I9 435 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CCNYL1Q8N7R7 359 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 C10orf82Q8WW14 230 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CENPNQ96H22 339 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 FAM19A4Q96LR4 140 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RILPQ96NA2 401 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 MRPL57Q9BQC6 102 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 LRRC61Q9BV99 259 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 OCR1Q9BZK8 76 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ULBP2Q9BZM5 246 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 KIR3DX1Q9H7L2 352 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 EHFQ9NZC4 300 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 MOB4Q9Y3A3 225 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CBY1Q9Y3M2 126 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ARHGAP21Q5T5U3 1957 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 HIVEP1P15822 2718 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ITPR2Q14571 2701 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 IGLV4-3A0A075B6K6 122 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 A0A087X002 238 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 DHRS7CA6NNS2 312 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 FOXI3A8MTJ6 420 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 PLPP3O14495 311 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CCDC22O60826 627 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SMIM24O75264 130 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 LYPLA1O75608 230 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 ATP5HO75947 161 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ARG1P05089 322 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 HTR1EP28566 365 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GRPRP30550 384 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CAV2P51636 162 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 AQP5P55064 265 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CDKN2DP55273 166 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CYCSP99999 105 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 PAX2Q02962 417 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TLE4Q04727 773 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ESPL1Q14674 2120 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms