RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SLC23A2Q9UGH3 650 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PRNDQ9UKY0 176 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF780BQ9Y6R6 833 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 NSD3Q9BZ95 1437 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SHANK2Q9UPX8 1470 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNFX1Q9P2E3 1918 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PRSS51A0A1B0GVH4 220 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 DAPL1A0PJW8 107 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE12JA6NER3 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 COLCA2A8K830 154 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 FABP5P3A8MUU1 101 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PDCD5O14737 125 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SH2D1BO14796 132 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SETD1AO15047 1707 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RGS16O15492 202 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SPRY2O43597 315 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PRKNO60260 465 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 EDF1O60869 148 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE7O76087 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 TOXO94900 526 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 MPC2O95563 127 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 C1RP00736 705 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RENP00797 406 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 MT-ND4LP03901 98 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SERPINE1P05121 402 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CD2P06729 351 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE12FP0CL80 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE12GP0CL81 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE12IP0CL82 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CD59P13987 128 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SELEP16581 610 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF37AP17032 561 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RPL35AP18077 110 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 WT1P19544 449 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 TCN2P20062 427 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CSRP1P21291 193 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GPX3P22352 226 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GATA3P23771 443 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 MIPP30301 263 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 DUTP33316 252 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OPRL1P41146 370 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SOX3P41225 446 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GPR6P46095 362 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 DLX1P56177 255 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CTBP2P56545 445 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR12D2P58182 307 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 NCS1P62166 190 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 EIF5AP63241 154 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RPL24P83731 157 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 FKBP3Q00688 224 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 HIST1H1AQ02539 215 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GNA12Q03113 381 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 ST3GAL4Q11206 333 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 GAGE4Q13068 117 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RGNQ15493 299 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CLEC12BQ2HXU8 276 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 C10orf91Q5T1B1 145 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 B3GNTL1Q67FW5 361 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SFRP4Q6FHJ7 346 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF343Q6P1L6 599 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RPL22L1Q6P5R6 122 aaKnown RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 CHMP1BQ7LBR1 199 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SLC35E3Q7Z769 313 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PNKDQ8N490 385 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SAMD12Q8N8I0 201 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PRR26Q8N8Z3 221 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 LRRC57Q8N9N7 239 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RELL2Q8NC24 303 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR8G5Q8NG78 346 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR1N2Q8NGR9 330 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR51Q1Q8NH59 317 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RHOXF1Q8NHV9 184 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RDH11Q8TC12 318 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR5P3Q8WZ94 311 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 AURKBQ96GD4 344 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 BTN2A3PQ96KV6 586 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 TEX37Q96LM6 180 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR2M4Q96R27 311 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 PDCD1LG2Q9BQ51 273 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 DPCDQ9BVM2 203 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR2J1Q9GZK6 312 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 ZBP1Q9H171 429 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 IFI27L2Q9H2X8 130 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 NHEJ1Q9H9Q4 299 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 KIAA1551Q9HCM1 1747 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 MMP26Q9NRE1 261 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 LYRM2Q9NU23 88 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-203ENST00000414174 FLRT3Q9NZU0 649 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 THYN1Q9P016 225 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 POMT2Q9UKY4 750 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 SLC7A7Q9UM01 511 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 FZD1Q9UP38 647 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 NSG2Q9Y328 171 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 LOXL2Q9Y4K0 774 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 OR1A2Q9Y585 309 aa3.06□□□□□ -1.92
SF3B1-203ENST00000414174 RAI2Q9Y5P3 530 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms