RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RASL12Q9NYN1 266 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF629Q9UEG4 869 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF727A8MUV8 499 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 PRR33A8MZF0 331 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 BCL2L11O43521 198 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 GABRA6Q16445 453 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 CSRP2Q16527 193 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 FAM214BQ7L5A3 538 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 MITD1Q8WV92 249 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 OCEL1Q9H607 264 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 A0A0J9YW62 118 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 PDGFAP04085 211 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 MPPED2Q15777 294 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 FAM27BQ5VT28 67 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 ZFP62Q8NB50 900 aaPredicted RBP15.21■□□□□ 0.03
PHRF1-202ENST00000413872 PECRQ9BY49 303 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 OR2D2Q9H210 308 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 BARX1Q9HBU1 254 aaPredicted RBP15.21■□□□□ 0.03
PHRF1-202ENST00000413872 C3orf85A0A1B0GTC6 90 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 OR4C45A6NMZ5 311 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 DXOO77932 396 aaKnown RBP15.21■□□□□ 0.03
PHRF1-202ENST00000413872 H3F3CQ6NXT2 135 aa15.21■□□□□ 0.03
PHRF1-202ENST00000413872 RFPL4AA6NLU0 287 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 RFPL4AL1F8VTS6 287 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 LANCL1O43813 399 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 PCMT1P22061 227 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 AKR1C3P42330 323 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 GZMKP49863 264 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 GZMMP51124 257 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF439Q8NDP4 499 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 WDR89Q96FK6 387 aaPredicted RBP15.21■□□□□ 0.02
PHRF1-202ENST00000413872 UBTD1Q9HAC8 227 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 FRRS1LQ9P0K9 344 aa15.21■□□□□ 0.02
PHRF1-202ENST00000413872 NUP214P35658 2090 aaPredicted RBP15.21■□□□□ 0.02
PHRF1-202ENST00000413872 HAND1O96004 215 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 BTNL8Q6UX41 500 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 PARP12Q9H0J9 701 aaKnown RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 DOCK3Q8IZD9 2030 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 TRDCB7Z8K6 153 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 TMPRSS2O15393 492 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 HOXB1P14653 301 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 CSF2RBP32927 897 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 TLE1Q04724 770 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF230Q9UIE0 474 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 TINAGQ9UJW2 476 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 HS3ST3B1Q9Y662 390 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 HIKESHIQ53FT3 197 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 AVPI1Q5T686 147 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 C11orf87Q6NUJ2 197 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 MOGAT3Q86VF5 341 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 SLC25A40Q8TBP6 338 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 PLPPR2Q96GM1 343 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 GRAMD2BQ96HH9 432 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 DEFB108AA8MXU0 73 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 PPP5D1E7EU14 171 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 Q56UQ5 140 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 SPICQ8N5J4 248 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 UBALD1Q8TB05 177 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF107Q9UII5 783 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 NKX2-8O15522 239 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 PDGFBP01127 241 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-202ENST00000413872 BPIFCQ8NFQ6 507 aa15.2■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF705GA8MUZ8 300 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-202ENST00000413872 IGKV1D-16P01601 117 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 HAGHQ16775 308 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 FAHD2BQ6P2I3 314 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-202ENST00000413872 SKA3Q8IX90 412 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 TCTE3Q8IZS6 198 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 FAHD2AQ96GK7 314 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 CHST5Q9GZS9 411 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 ID4P47928 161 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 CNN1P51911 297 aaKnown RBP15.19■□□□□ 0.02
PHRF1-202ENST00000413872 OR52B4Q8NGK2 314 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 CXorf58Q96LI9 332 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 AAMDCQ9H7C9 122 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 SPTA1P02549 2419 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 CDIPTO14735 213 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 CTDSPLO15194 276 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 TGOLN2O43493 480 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 HYAL3O43820 417 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-202ENST00000413872 PTP4A3O75365 173 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 OR5B3Q8NH48 314 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 TSTD3H0UI37 97 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 MAGEB1P43366 347 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 MDP1Q86V88 176 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 TMEM123Q8N131 208 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 TMEM147Q9BVK8 224 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 ANXA10Q9UJ72 324 aa15.19■□□□□ 0.02
PHRF1-202ENST00000413872 A0A1W2PQM1 296 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 OIP5O43482 229 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 S100A8P05109 93 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 CD80P33681 288 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 SP6Q3SY56 376 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 TSPO2Q5TGU0 170 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 WNT2BQ93097 391 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms