RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PPT2Q9UMR5 302 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 VDAC3Q9Y277 283 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 C3orf85A0A1B0GTC6 90 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1W2PR48 441 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SNRPGP15A8MWD9 76 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PAPLNO95428 1278 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 LHBP01229 141 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 AMY1AP04745 511 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GPX1P07203 203 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MP68P56378 58 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PSG6Q00889 435 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C2orf83Q53S99 150 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MIC13Q5XKP0 118 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MRM1Q6IN84 353 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ASCL5Q7RTU5 278 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 RBM45Q8IUH3 476 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR10W1Q8NGF6 305 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PATE1Q8WXA2 126 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TRMT61AQ96FX7 289 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 WDR92Q96MX6 357 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GREM2Q9H772 168 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GPR35Q9HC97 309 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 HS3ST2Q9Y278 367 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SMIM28A0A1B0GU29 152 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR2A4O95047 310 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 CXorf1O96002 111 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C1QBP02746 253 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TCRBP04435 133 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 HOXB4P17483 251 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GNG10P50151 68 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SELENOTP62341 195 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 CEACAM7Q14002 265 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PIP5KL1Q5T9C9 394 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR9G4Q8NGQ1 327 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR2A7Q96R45 310 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 UBL5Q9BZL1 73 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR51M1Q9H341 326 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 NHP2Q9NX24 153 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TRAV12-3A0A0B4J271 114 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 hADV38S2A0JD32 116 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 M0R2P5 195 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SLC17A2O00624 439 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GJB5O95377 273 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 REG1AP05451 166 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FBXO45P0C2W1 286 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF56Q15929 161 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM170BQ5T4T1 132 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FAM72AQ5TYM5 149 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FAM174AQ8TBP5 190 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 IP6K3Q96PC2 410 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TINAGQ9UJW2 476 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 IER3IP1Q9Y5U9 82 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C7orf77A4D0Y5 90 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C7orf71A4D174 169 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C7orf72A4D263 438 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 NPIPB7O75200 414 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 CSF2RBP32927 897 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SSR4P51571 173 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SLC38A11Q08AI6 406 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C10orf113Q5VZT2 155 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SPNS2Q8IVW8 549 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 C10orf111Q8N326 155 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FAM57AQ8TBR7 257 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TUBA4BQ9H853 241 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 DTLQ9NZJ0 730 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ERCC6L2Q5T890 1561 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 CASZ1Q86V15 1759 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 M0R082 166 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SPINK4O60575 86 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FPR2P25090 351 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 UBE2BP63146 152 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MRPS21P82921 87 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FOXK2Q01167 660 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 FAM209BQ5JX69 171 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 NPNTQ6UXI9 565 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 DNM1P46Q6ZS02 220 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 GLRX5Q86SX6 157 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 VSIG10LQ86VR7 867 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM252Q8N6L7 170 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 RNASEH2CQ8TDP1 164 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SEMA6BQ9H3T3 888 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 LPAR3Q9UBY5 353 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OPN4Q9UHM6 478 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MBD1Q9UIS9 605 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ENTPD2Q9Y5L3 495 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ROBO3Q96MS0 1386 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1B0GU03 582 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 CTSDP07339 412 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 HSPE1P61604 102 aaKnown RBP4.1□□□□□ -1.75
PTPN13-202ENST00000411767 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ABHD3Q8WU67 409 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 IRF7Q92985 503 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 MUS81Q96NY9 551 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 ABHD1Q96SE0 405 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SNHG12Q9BXW3 62 aa4.1□□□□□ -1.75
PTPN13-202ENST00000411767 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms