RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 CD70P32970 193 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 GAMTQ14353 236 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 VSTM2AQ8TAG5 236 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 APOOQ9BUR5 198 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 RAB33BQ9H082 229 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 ISG20L2Q9H9L3 353 aaKnown RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 TCRBV21S2A2A0A5A6 115 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 SH2D5Q6ZV89 423 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 KIR3DX1Q9H7L2 352 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 WNK3Q9BYP7 1800 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 NXPH3O95157 252 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 LBX1P52954 281 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 RPL18Q07020 188 aaKnown RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 OR6C1Q96RD1 312 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 DHRS3O75911 302 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 CD22P20273 847 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 NTHL1P78549 312 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 CLEC18BQ6UXF7 455 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 C11orf40Q8WZ69 217 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 APOBEC3DQ96AK3 386 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 SNURFLB1AK76 121 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 SOD3P08294 240 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 EPHA8P29322 1005 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 GNG10P50151 68 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 KLF9Q13886 244 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 TWIST1Q15672 202 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 ZNF764Q96H86 408 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 MBNL1Q9NR56 388 aaKnown RBP11.55□□□□□ -0.56
COL6A3-206ENST00000409809 TAAR3PQ9P1P4 343 aa11.55□□□□□ -0.56
COL6A3-206ENST00000409809 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TSPAN13O95857 204 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 PAQR6Q6TCH4 344 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 ISOC2Q96AB3 205 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 SLC7A10Q9NS82 523 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 HEPACAM2A8MVW5 462 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 A8MWL6 223 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 EDDM3BP56851 147 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 Q56UQ5 140 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 SLC16A11Q8NCK7 471 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 PTPMT1Q8WUK0 201 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-206ENST00000409809 FAM131CQ96AQ9 280 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 DNAJA3Q96EY1 480 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 MRPS2Q9Y399 296 aaKnown RBP11.54□□□□□ -0.56
COL6A3-206ENST00000409809 A0A1W2PPC4 97 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 SLC37A1P57057 533 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 ARG2P78540 354 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 OR2D2Q9H210 308 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 NTMQ9P121 344 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 PSG11Q9UQ72 335 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 GFYI3L273 518 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 M0QZ24 198 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 A0A0A6YYC8 382 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-206ENST00000409809 I3L1I5 382 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-206ENST00000409809 NPY1RP25929 384 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 SELENOPP49908 381 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 PMP22Q01453 160 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 VASH2Q86V25 355 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 MVB12AQ96EY5 273 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 IP6K3Q96PC2 410 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TRGV10A0A0A0MS01 117 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 JAG1P78504 1218 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 NHLRC1Q6VVB1 395 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TMEM179BQ7Z7N9 219 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 SGMS2Q8NHU3 365 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
COL6A3-206ENST00000409809 POLEQ07864 2286 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 RPL30P62888 115 aaKnown RBP11.53□□□□□ -0.56
COL6A3-206ENST00000409809 HSD11B1LQ7Z5J1 315 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 RBM45Q8IUH3 476 aaKnown RBP11.53□□□□□ -0.56
COL6A3-206ENST00000409809 SIRT6Q8N6T7 355 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 GABRG3Q99928 467 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 DSPPQ9NZW4 1301 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 NPPBP16860 134 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 OPRM1P35372 400 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 PRTGQ2VWP7 1150 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 SLC35B1P78383 322 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 GRAMD2BQ96HH9 432 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 OBP2AQ9NY56 170 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.53□□□□□ -0.56
COL6A3-206ENST00000409809 LIM2P55344 173 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 A0A087WWC5 75 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 ZC3H12DA2A288 527 aaKnown RBP11.53□□□□□ -0.56
COL6A3-206ENST00000409809 MYADML2A6NDP7 307 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 H0YIG0 161 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 ACP1P24666 158 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 DOCK6Q96HP0 2047 aa11.53□□□□□ -0.56
COL6A3-206ENST00000409809 PRR35P0CG20 571 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms