RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CRHP06850 196 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 NOVA1P51513 510 aaKnown RBP17.26■□□□□ 0.35
USP39-204ENST00000409766 TGFBR3Q03167 851 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 TMEM211Q6ICI0 200 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 MYPOPQ86VE0 399 aaPredicted RBP17.26■□□□□ 0.35
USP39-204ENST00000409766 MARS2Q96GW9 593 aaKnown RBP17.26■□□□□ 0.35
USP39-204ENST00000409766 HIST1H2AAQ96QV6 131 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 MPC1Q9Y5U8 109 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 RIF1Q5UIP0 2472 aaKnown RBP17.26■□□□□ 0.35
USP39-204ENST00000409766 ANKRD30BLA7E2S9 258 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 ADAP1O75689 374 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 KNG1P01042 644 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 CTSDP07339 412 aaPredicted RBP17.25■□□□□ 0.35
USP39-204ENST00000409766 RTP5Q14D33 572 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 TBC1D28Q2M2D7 210 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 MKXQ8IYA7 352 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 KCNRGQ8N5I3 272 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 HS3ST6Q96QI5 342 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 ZNF442Q9H7R0 627 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 PLSCR2Q9NRY7 297 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 RNF222A6NCQ9 220 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 PRSS44E7EML9 344 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 OR2F2O95006 317 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 PSMB6P28072 239 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 CALCRP30988 508 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 PTGER4P35408 488 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 CYCSP99999 105 aaKnown RBP17.25■□□□□ 0.35
USP39-204ENST00000409766 OR2F1Q13607 317 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 SLC22A25Q6T423 547 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 Q6ZT83 130 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 SLC51BQ86UW2 128 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 CCDC36Q8IYA8 594 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 OR5M9Q8NGP3 310 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 DHRS9Q9BPW9 319 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 ZNF286AQ9HBT8 521 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 CHMP1AQ9HD42 196 aaPredicted RBP17.25■□□□□ 0.35
USP39-204ENST00000409766 DLL3Q9NYJ7 618 aa17.25■□□□□ 0.35
USP39-204ENST00000409766 J3QW42 95 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 CELA3BP08861 270 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 ALKAL2Q6UX46 152 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 THAP6Q8TBB0 222 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 SARAFQ96BY9 339 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 KIF25Q9UIL4 384 aa17.24■□□□□ 0.35
USP39-204ENST00000409766 TRAPPC2LH3BP13 241 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 LYZL6O75951 148 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 KIR2DL2P43627 348 aaPredicted RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 GABRA6Q16445 453 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 OR2T2Q6IF00 324 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 ACOT7LQ6ZUV0 252 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 SCARB1Q8WTV0 552 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 MICU1Q9BPX6 476 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 MBD2Q9UBB5 411 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 CACNA1GO43497 2377 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 A0A1W2PR80 420 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 OR5B21A6NL26 309 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 MPTX1A8MV57 137 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 TPD52L2O43399 206 aaKnown RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 SYNGR1O43759 233 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 CNOT4O95628 575 aaKnown RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 IFNA2P01563 188 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 IL32P24001 234 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 UBE2NP61088 152 aaKnown RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 ATXN7L3Q14CW9 347 aaPredicted RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 SPATA46Q5T0L3 261 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 FBXW12Q6X9E4 464 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 C9orf106Q8NAJ2 232 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 EXTL1Q92935 676 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 WNT2BQ93097 391 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 TAAR6Q96RI8 345 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 VRK1Q99986 396 aaPredicted RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 RCC2Q9P258 522 aaKnown RBP17.23■□□□□ 0.35
USP39-204ENST00000409766 IL36RNQ9UBH0 155 aa17.23■□□□□ 0.35
USP39-204ENST00000409766 ESPL1Q14674 2120 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 CRYM-AS1A6NIL9 109 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 ZNF205O95201 554 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 RRASP10301 218 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 GNG3P63215 75 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 MPV17LQ2QL34 196 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 HAGHLQ6PII5 290 aaPredicted RBP17.22■□□□□ 0.35
USP39-204ENST00000409766 ASCL5Q7RTU5 278 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 CNEP1R1Q8N9A8 125 aa17.22■□□□□ 0.35
USP39-204ENST00000409766 TRBV6-7A0A0A0MS04 114 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 PROB1E7EW31 1015 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 SMPD2O60906 423 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 CA6P23280 308 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 IDH3GP51553 393 aaPredicted RBP17.21■□□□□ 0.35
USP39-204ENST00000409766 MRPL49Q13405 166 aaKnown RBP17.21■□□□□ 0.35
USP39-204ENST00000409766 ZNF573Q86YE8 665 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 RNF126Q9BV68 326 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 WDR13Q9H1Z4 485 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 SHANK1Q9Y566 2161 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 SPDEFO95238 335 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 FCGR2CP31995 323 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 PLEKHN1Q494U1 663 aaPredicted RBP17.21■□□□□ 0.35
USP39-204ENST00000409766 Q6ZS49 121 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 COMMD7Q86VX2 200 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 SGPP2Q8IWX5 399 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 ZADH2Q8N4Q0 377 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 OR10C1Q96KK4 312 aa17.21■□□□□ 0.35
USP39-204ENST00000409766 METTL8Q9H825 291 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms